Factsheet for Os04t0482300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0601800-03
Os02t0746000-01
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	Os02t0746000-01	AT1G26830.1	15772280
AT3G48360.1	Os11t0171500-01	AT1G35670.1	19130088
AT3G48360.1	Os12t0169800-00	AT1G35670.1	19130088
AT3G48360.1	Os02t0601800-03	AT3G01770.1	15316289
AT3G48360.1	Os11t0171500-01	AT4G09570.1	19130088
AT3G48360.1	Os12t0169800-00	AT4G09570.1	19130088
AT5G63160.1	Os02t0746000-01	AT1G26830.1	15772280
AT5G63160.1	Os02t0601800-03	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G359600.1	Wheat	cytosol	70.99	74.34
TraesCS2A01G323000.1	Wheat	cytosol	70.42	73.75
TraesCS2D01G339900.1	Wheat	cytosol	69.3	72.57
TraesCS2B01G359400.1	Wheat	cytosol	69.01	70.81
Zm00001d025707_P001	Maize	cytosol	67.32	70.09
TraesCS2A01G323200.1	Wheat	cytosol	68.17	69.94
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	69.01	67.68
HORVU2Hr1G083410.1	Barley	cytosol	14.65	65.0
TraesCS2D01G339700.1	Wheat	cytosol	68.45	64.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	52.39	52.69
GSMUA_Achr9P02050_001	Banana	cytosol	49.86	51.91
GSMUA_Achr6P12110_001	Banana	nucleus	48.45	49.71
HORVU2Hr1G083430.3	Barley	nucleus	22.82	46.29
HORVU2Hr1G083490.1	Barley	extracellular	11.27	45.98
PGSC0003DMT400069397	Potato	nucleus	41.41	44.14
Solyc03g111710.2.1	Tomato	nucleus	41.69	42.9
Os01t0908200-01	Rice	cytosol	41.69	42.65
PGSC0003DMT400039384	Potato	nucleus	41.41	42.61
Solyc06g071820.2.1	Tomato	nucleus	41.41	42.12
KRH03892	Soybean	cytosol	40.28	41.33
KRH57174	Soybean	cytosol	25.63	41.18
VIT_17s0000g09790.t01	Wine grape	cytosol	38.87	39.77
PGSC0003DMT400069392	Potato	nucleus	38.87	39.54
KRH63672	Soybean	nucleus	36.34	39.45
KRH37914	Soybean	cytosol	10.99	39.0
Solyc06g071830.2.1	Tomato	nucleus	36.34	38.74
CDY41504	Canola	nucleus	36.06	38.55
AT3G48360.1	Thale cress	nucleus	38.03	37.09
Bra038612.1-P	Field mustard	nucleus	37.75	36.91
CDX84392	Canola	nucleus	36.62	35.91
AT5G63160.1	Thale cress	nucleus	36.9	35.89
Bra029235.1-P	Field mustard	nucleus	36.9	35.6
CDY48173	Canola	nucleus	35.77	34.99
Bra018065.1-P	Field mustard	nucleus	36.06	33.86
CDY39576	Canola	nucleus	34.65	33.52
CDY30743	Canola	nucleus	37.18	33.25
CDY70710	Canola	nucleus	14.65	33.12
CDY45741	Canola	nucleus	36.62	32.75
Os01t0893400-01	Rice	nucleus	34.08	29.3
Os02t0596700-00	Rice	plastid	20.28	24.16

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	EntrezGene:4336193
EMBL:AK064143	ProteinID:BAF15031.1	ProteinID:BAS89756.1	InterPro:BTB/POZ_dom	ProteinID:CAD41101.2	GO:GO:0003674
GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0043161	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
EnsemblPlantsGene:Os04g0482300	EnsemblPlants:Os04t0482300-01	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413
PANTHER:PTHR24413:SF211	UniProt:Q7XUP5	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C
SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI00001B0CFD	RefSeq:XP_015637017.1	InterPro:Znf_TAZ
SEG:seg	:	:	:	:	:

Description

Kelch related domain containing protein. (Os04t0482300-01)

Coordinates

chr4:+:24115971..24118142

Molecular Weight (calculated)

39377.2 Da

IEP (calculated)

8.938

GRAVY (calculated)

-0.302

Length

355 amino acids

Sequence
(BLAST)

001: MTQWADLDAL RPAVAADVQV VTSDGKSIAA HSFVLGTASP VLERMIERAR RGWNAECTIR VLGVSSDAVF AFLQLLYASR VTPEDEEVVT AHGPQLLALS
101: HAYRIGWLKR AAEASVTARL TPEHAVDMLK LARLCDAPRL YLRCARLAAK DFAAVERSEG WRFARRHDAA LELEILQLLE DADQRRERWA RERASREAYR
201: QLGEAMDSLE HIFSDDGCSC ADADADADTD APPCRGLRLL MRHYATCGAR KAAPGGGCTR CKRMVQLFRL HASVCDRAAP HDDGDRPCRV PLCSHFKGKM
301: RAEKADKTWR LLVKKVTRAR AMSRLAAGRE REVVPEVVAA SWARYSSSGG AARLR

Best Arabidopsis Sequence Match ( AT5G63160.1 )
(BLAST)

001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM

Arabidopsis Description

BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.