Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63160.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84392 | Canola | nucleus | 95.78 | 87.85 |
| AT5G63160.1 | Thale cress | nucleus | 87.95 | 80.0 |
| CDY70710 | Canola | nucleus | 35.24 | 74.52 |
| CDY30743 | Canola | nucleus | 88.25 | 73.8 |
| CDY45741 | Canola | nucleus | 87.05 | 72.8 |
| CDY48173 | Canola | nucleus | 72.29 | 66.12 |
| CDY39576 | Canola | nucleus | 71.39 | 64.58 |
| KRH57174 | Soybean | cytosol | 39.16 | 58.82 |
| PGSC0003DMT400069397 | Potato | nucleus | 58.13 | 57.96 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 59.94 | 57.35 |
| Solyc06g071820.2.1 | Tomato | nucleus | 58.73 | 55.87 |
| PGSC0003DMT400039384 | Potato | nucleus | 57.83 | 55.65 |
| Solyc03g111710.2.1 | Tomato | nucleus | 57.23 | 55.07 |
| Solyc06g071830.2.1 | Tomato | nucleus | 54.52 | 54.35 |
| PGSC0003DMT400069392 | Potato | nucleus | 56.93 | 54.15 |
| KRH63672 | Soybean | nucleus | 50.9 | 51.68 |
| KRH03892 | Soybean | cytosol | 53.31 | 51.16 |
| KRH37914 | Soybean | cytosol | 14.16 | 47.0 |
| GSMUA_Achr11P... | Banana | nucleus | 49.7 | 46.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.59 | 45.93 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 47.29 | 44.48 |
| Os01t0908200-01 | Rice | cytosol | 45.18 | 43.23 |
| Zm00001d042443_P001 | Maize | cytosol | 44.58 | 43.02 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 42.77 | 41.64 |
| EES01931 | Sorghum | cytosol | 43.67 | 41.55 |
| HORVU3Hr1G092090.3 | Barley | mitochondrion, nucleus | 24.4 | 41.12 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 42.17 | 40.46 |
| TraesCS3D01G408100.1 | Wheat | cytosol, plastid | 42.17 | 40.11 |
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 41.57 | 39.66 |
| TraesCS3B01G448000.1 | Wheat | cytosol, plastid | 41.27 | 39.6 |
| TraesCS3D01G408000.1 | Wheat | plastid | 41.87 | 39.38 |
| TraesCS3B01G448100.1 | Wheat | plastid | 41.57 | 39.2 |
| TraesCS2A01G323000.1 | Wheat | cytosol | 39.16 | 38.35 |
| GSMUA_Achr6P12420_001 | Banana | nucleus | 42.77 | 38.17 |
| TraesCS2D01G339900.1 | Wheat | cytosol | 38.55 | 37.76 |
| TraesCS2B01G359600.1 | Wheat | cytosol | 38.55 | 37.76 |
| TraesCS3A01G413700.1 | Wheat | cytosol, plastid | 39.76 | 37.61 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 9.04 | 37.5 |
| Zm00001d025707_P001 | Maize | cytosol | 37.65 | 36.66 |
| TraesCS2B01G359400.1 | Wheat | cytosol | 37.95 | 36.42 |
| Os04t0482300-01 | Rice | cytosol | 38.55 | 36.06 |
| TraesCS2A01G323200.1 | Wheat | cytosol | 37.35 | 35.84 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 37.65 | 34.53 |
| EES05370 | Sorghum | plastid | 36.45 | 33.99 |
| CDY29568 | Canola | nucleus | 38.55 | 33.77 |
| CDY50978 | Canola | nucleus, plastid | 37.65 | 33.42 |
| CDX72641 | Canola | nucleus, plastid | 38.25 | 33.42 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 37.95 | 33.25 |
| CDY36495 | Canola | cytosol | 37.95 | 33.16 |
| CDX75666 | Canola | nucleus | 37.35 | 33.16 |
| CDY08721 | Canola | cytosol | 37.65 | 32.89 |
| Zm00001d017101_P001 | Maize | plastid | 36.45 | 32.79 |
| CDY10140 | Canola | plastid | 34.64 | 31.34 |
| CDX86561 | Canola | nucleus | 38.55 | 30.55 |
| CDY15554 | Canola | nucleus | 37.35 | 29.25 |
| HORVU2Hr1G083430.3 | Barley | nucleus | 11.45 | 21.71 |
| Os02t0596700-00 | Rice | plastid | 15.66 | 17.45 |
| HORVU2Hr1G083490.1 | Barley | extracellular | 2.41 | 9.2 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | GO:A0A078HVX4 |
| UniProt:A0A078HVX4 | InterPro:BTB/POZ_dom | EnsemblPlants:CDY41504 | ProteinID:CDY41504 | ProteinID:CDY41504.1 | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016573 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00073117001 | InterPro:IPR000197 | InterPro:IPR000210 |
| InterPro:IPR035898 | PFAM:PF00651 | PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF75 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 |
| InterPro:TAZ_dom_sf | UniParc:UPI0004EDE2FE | InterPro:Znf_TAZ | SEG:seg | : | : |
Description
BnaA06g22570DBnaA06g22570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVX4]
Coordinates
chrLK032499:-:37046..38683
Molecular Weight (calculated)
37638.1 Da
IEP (calculated)
9.027
GRAVY (calculated)
-0.230
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITATENDG VSLTTDKISY DLVETDVEII TSGRRRIPGH SGVLAAASPV LKNIIEKPRK SHGGSSKSVI KILGVPCDAV SVFIRFLYSS SLTEKEMESY
101: GIHLLALSHV YMVTHLKQRC TKGVGERVTV ENVVDVLQLA RLCDAPGLCL KCMRLIHSKF KTVEQTEGWK FLQENDLFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYMQL SEAMECIEHI CTEGCTLVGP SSNLDNNMLK PGPCSAFSTC YGLQLLIRHF AVCKKRVVGK GCIRCKRMIQ LLRLHSSICD QSESCRVPLC
301: SRQFKQRGEK DKKMVEDTKW NVLVRRVYNI SN
101: GIHLLALSHV YMVTHLKQRC TKGVGERVTV ENVVDVLQLA RLCDAPGLCL KCMRLIHSKF KTVEQTEGWK FLQENDLFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYMQL SEAMECIEHI CTEGCTLVGP SSNLDNNMLK PGPCSAFSTC YGLQLLIRHF AVCKKRVVGK GCIRCKRMIQ LLRLHSSICD QSESCRVPLC
301: SRQFKQRGEK DKKMVEDTKW NVLVRRVYNI SN
001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM
Arabidopsis Description
BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.