Factsheet for TraesCS3A01G413700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G087800.1
TraesCS3A01G122200.1
TraesCS3B01G103200.2
TraesCS3B01G141400.2
TraesCS3D01G087900.4
TraesCS3D01G124100.1
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1
TraesCS6A01G214000.1
TraesCS6A01G306600.1
TraesCS6B01G244000.2
TraesCS6B01G335200.1
TraesCS6D01G196600.3
TraesCS6D01G285800.1
TraesCS7A01G312700.2
TraesCS7B01G212400.2
TraesCS7D01G309100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	TraesCS6A01G306600.1	AT1G26830.1	15772280
AT3G48360.1	TraesCS6B01G335200.1	AT1G26830.1	15772280
AT3G48360.1	TraesCS6D01G285800.1	AT1G26830.1	15772280
AT3G48360.1	TraesCS4A01G206200.2	AT1G35670.1	19130088
AT3G48360.1	TraesCS4B01G109800.2	AT1G35670.1	19130088
AT3G48360.1	TraesCS4D01G107200.1	AT1G35670.1	19130088
AT3G48360.1	TraesCS5A01G107900.1	AT1G35670.1	19130088
AT3G48360.1	TraesCS5B01G115400.1	AT1G35670.1	19130088
AT3G48360.1	TraesCS5D01G122800.1	AT1G35670.1	19130088
AT3G48360.1	TraesCS3A01G087800.1	AT3G01770.1	15316289
AT3G48360.1	TraesCS3A01G122200.1	AT3G01770.1	15316289
AT3G48360.1	TraesCS3B01G103200.2	AT3G01770.1	15316289
AT3G48360.1	TraesCS3B01G141400.2	AT3G01770.1	15316289
AT3G48360.1	TraesCS3D01G087900.4	AT3G01770.1	15316289
AT3G48360.1	TraesCS3D01G124100.1	AT3G01770.1	15316289
AT3G48360.1	TraesCS6A01G214000.1	AT3G01770.1	15316289
AT3G48360.1	TraesCS6B01G244000.2	AT3G01770.1	15316289
AT3G48360.1	TraesCS6D01G196600.3	AT3G01770.1	15316289
AT3G48360.1	TraesCS7A01G312700.2	AT3G01770.1	15316289
AT3G48360.1	TraesCS7B01G212400.2	AT3G01770.1	15316289
AT3G48360.1	TraesCS7D01G309100.1	AT3G01770.1	15316289
AT3G48360.1	TraesCS4A01G206200.2	AT4G09570.1	19130088
AT3G48360.1	TraesCS4B01G109800.2	AT4G09570.1	19130088
AT3G48360.1	TraesCS4D01G107200.1	AT4G09570.1	19130088
AT3G48360.1	TraesCS5A01G107900.1	AT4G09570.1	19130088
AT3G48360.1	TraesCS5B01G115400.1	AT4G09570.1	19130088
AT3G48360.1	TraesCS5D01G122800.1	AT4G09570.1	19130088
AT5G63160.1	TraesCS6A01G306600.1	AT1G26830.1	15772280
AT5G63160.1	TraesCS6B01G335200.1	AT1G26830.1	15772280
AT5G63160.1	TraesCS6D01G285800.1	AT1G26830.1	15772280
AT5G63160.1	TraesCS3A01G087800.1	AT3G01770.1	15316289
AT5G63160.1	TraesCS3A01G122200.1	AT3G01770.1	15316289
AT5G63160.1	TraesCS3B01G103200.2	AT3G01770.1	15316289
AT5G63160.1	TraesCS3B01G141400.2	AT3G01770.1	15316289
AT5G63160.1	TraesCS3D01G087900.4	AT3G01770.1	15316289
AT5G63160.1	TraesCS3D01G124100.1	AT3G01770.1	15316289
AT5G63160.1	TraesCS6A01G214000.1	AT3G01770.1	15316289
AT5G63160.1	TraesCS6B01G244000.2	AT3G01770.1	15316289
AT5G63160.1	TraesCS6D01G196600.3	AT3G01770.1	15316289
AT5G63160.1	TraesCS7A01G312700.2	AT3G01770.1	15316289
AT5G63160.1	TraesCS7B01G212400.2	AT3G01770.1	15316289
AT5G63160.1	TraesCS7D01G309100.1	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G413600.1	Wheat	cytosol, plastid	90.31	91.09
TraesCS3B01G448100.1	Wheat	plastid	90.88	90.62
TraesCS3D01G408000.1	Wheat	plastid	88.89	88.39
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	49.57	88.32
TraesCS3B01G448000.1	Wheat	cytosol, plastid	85.75	86.99
Os01t0908200-01	Rice	cytosol	67.81	68.59
EES01931	Sorghum	cytosol	66.95	67.34
Zm00001d042443_P001	Maize	cytosol	65.24	66.57
GSMUA_Achr11P...	Banana	nucleus	47.86	47.32
GSMUA_AchrUn_...	Banana	nucleus	44.73	45.64
KRH57174	Soybean	cytosol	27.92	44.34
KRH63672	Soybean	nucleus	40.74	43.73
TraesCS2A01G323000.1	Wheat	cytosol	42.17	43.66
PGSC0003DMT400069397	Potato	nucleus	40.46	42.64
VIT_17s0000g09790.t01	Wine grape	cytosol	41.88	42.36
KRH03892	Soybean	cytosol	41.6	42.2
KRH37914	Soybean	cytosol	11.68	41.0
TraesCS2A01G323200.1	Wheat	cytosol	40.17	40.75
GSMUA_Achr6P12420_001	Banana	nucleus	43.02	40.59
PGSC0003DMT400039384	Potato	nucleus	39.89	40.58
PGSC0003DMT400069392	Potato	nucleus	40.17	40.4
Solyc06g071820.2.1	Tomato	nucleus	40.17	40.4
Solyc03g111710.2.1	Tomato	nucleus	39.32	40.0
Solyc06g071830.2.1	Tomato	nucleus	37.89	39.94
CDY41504	Canola	nucleus	37.61	39.76
Bra029235.1-P	Field mustard	nucleus	41.31	39.4
AT3G48360.1	Thale cress	nucleus	39.32	37.91
CDX84392	Canola	nucleus	39.03	37.85
Bra038612.1-P	Field mustard	nucleus	39.03	37.74
AT5G63160.1	Thale cress	nucleus	38.75	37.26
CDY70710	Canola	nucleus	16.52	36.94
CDY30743	Canola	nucleus	41.6	36.78
CDY48173	Canola	nucleus	37.89	36.64
CDY45741	Canola	nucleus	41.31	36.52
CDY39576	Canola	nucleus	37.32	35.69
Bra018065.1-P	Field mustard	nucleus	37.61	34.92
TraesCS3A01G400400.1	Wheat	cytosol	34.47	30.56

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf
EnsemblPlantsGene:TraesCS3A01G413700	EnsemblPlants:TraesCS3A01G413700.1	InterPro:Znf_TAZ	TIGR:cd14734	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:657271057..657274693

Molecular Weight (calculated)

38908.1 Da

IEP (calculated)

10.212

GRAVY (calculated)

-0.366

Length

351 amino acids

Sequence
(BLAST)

001: MPEAPARAAG GGGGASAPAD VDVVTSSGRR KIAAHSSVLA SASPVLETTL ERRLQRLRES GKGGRAVVRV RGVTDHVAAA FVRLLYAGSR RGEGEVDEDV
101: ERYAEQLLVL AHAYRVPWLK RWCQEAIGSR LTPGTVVDAL QLADLCDAPQ LHLRCMRLLA KEFRAVKRTE AWRFLRDNDP WQELDVLRQL HDADMRRRKW
201: RRKRAEQKVY MELSDAMDIL RHICTDGCTE VGPVGQAPAN SPCPAYATCR GLQLLIRHFS RCQSRATCPR CQRMWQLLRL HAALCRVPDG HCNTPLCTQF
301: KLKEQQKEAV SASAAAKAGN GRWGLLVKKV KAVSVMSSLG KRSPPSQSQC C

Best Arabidopsis Sequence Match ( AT3G48360.3 )
(BLAST)

001: MERYGIHLLA LSHVYMVTQL KQRCSKGVVQ RLTTENVVDV LQLARLCDAP DVCLRSMRLI HSQFKTVEQT EGWKFIQEHD PFLELDILQF IDDAESRKKR
101: RRRHRKEQDL YMQLSEAMEC IEHICTQGCT LVGPSNVVDN NKKSMTAEKS EPCKAFSTCY GLQLLIRHFA VCKRRNNDKG CLRCKRMLQL FRLHSLICDQ
201: PDSCRVPLCR QFRKRGEQDK KMGEDTKWKL LVTRVVSAKA MTSLCQSKKN KCEQAQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.