Factsheet for TraesCS7D01G309100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G323000.1
TraesCS2A01G323200.1
TraesCS2B01G359400.1
TraesCS2B01G359600.1
TraesCS2D01G339700.1
TraesCS2D01G339900.1
TraesCS3A01G413600.1
TraesCS3A01G413700.1
TraesCS3B01G448000.1
TraesCS3B01G448100.1
TraesCS3D01G408000.1
TraesCS3D01G408100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01770.1	TraesCS2A01G323000.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2A01G323200.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2B01G359400.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2B01G359600.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2D01G339700.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2D01G339900.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3A01G413600.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3A01G413700.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3B01G448000.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3B01G448100.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3D01G408000.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS3D01G408100.1	AT3G48360.1	15316289
AT3G01770.1	TraesCS2A01G323000.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS2A01G323200.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS2B01G359400.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS2B01G359600.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS2D01G339700.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS2D01G339900.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3A01G413600.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3A01G413700.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3B01G448000.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3B01G448100.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3D01G408000.1	AT5G63160.1	15316289
AT3G01770.1	TraesCS3D01G408100.1	AT5G63160.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G312700.2	Wheat	nucleus	98.93	98.93
TraesCS7B01G212400.2	Wheat	nucleus	98.0	98.0
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	96.13	92.55
Zm00001d035167_P001	Maize	nucleus	62.53	61.87
KXG24325	Sorghum	nucleus	58.4	61.86
Zm00001d049638_P009	Maize	nucleus	61.2	59.07
GSMUA_Achr8P01140_001	Banana	nucleus	49.2	49.13
GSMUA_Achr8P08920_001	Banana	nucleus	39.87	46.0
VIT_17s0000g01830.t01	Wine grape	nucleus	46.0	45.7
Bra025262.1-P	Field mustard	nucleus	32.27	44.73
KRH57199	Soybean	nucleus	43.6	44.25
VIT_14s0171g00380.t01	Wine grape	nucleus	42.13	42.88
KRH63729	Soybean	nucleus	44.67	42.78
KRH54219	Soybean	nucleus	44.53	42.39
CDY13699	Canola	nucleus	25.33	41.58
Solyc03g111090.2.1	Tomato	nucleus	43.2	41.49
GSMUA_Achr2P20970_001	Banana	nucleus	39.73	41.39
GSMUA_Achr10P...	Banana	nucleus	35.2	41.38
KRH07021	Soybean	nucleus	40.93	41.26
Solyc02g093880.2.1	Tomato	nucleus	39.87	41.24
CDY20057	Canola	nucleus	35.47	41.24
Bra039088.1-P	Field mustard	nucleus	35.73	41.17
PGSC0003DMT400039290	Potato	nucleus	42.93	40.97
PGSC0003DMT400052108	Potato	nucleus	39.6	40.74
KRG94435	Soybean	nucleus	40.27	40.7
AT5G14270.2	Thale cress	nucleus	36.27	39.48
AT3G01770.1	Thale cress	nucleus	32.53	39.35
Bra038624.1-P	Field mustard	nucleus	12.67	39.26
KRH07022	Soybean	nucleus	40.93	39.06
TraesCS6D01G196600.3	Wheat	nucleus	36.13	38.55
CDX83673	Canola	nucleus	25.33	38.15
TraesCS3D01G087900.4	Wheat	nucleus	36.0	37.71
TraesCS3D01G124100.1	Wheat	nucleus	35.33	37.17
CDX84396	Canola	nucleus	29.6	36.22
GSMUA_Achr3P02660_001	Banana	plasma membrane	30.53	35.02
AT3G27260.3	Thale cress	nucleus	36.27	33.09
GSMUA_Achr3P02670_001	Banana	nucleus	30.8	32.77
TraesCS7D01G526000.1	Wheat	nucleus, plastid	20.67	28.7
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	8.13	28.24
AT5G63320.1	Thale cress	nucleus	38.67	27.33
CDY48139	Canola	nucleus	31.33	26.58
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	7.87	26.58
TraesCS3D01G146600.1	Wheat	nucleus, plastid	16.27	24.11
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	13.73	21.91
CDY16729	Canola	nucleus	33.2	21.8
Bra035848.1-P	Field mustard	nucleus	33.2	20.91
TraesCS6D01G177700.1	Wheat	cytosol, plastid	16.8	19.84
TraesCS7D01G074500.1	Wheat	cytosol	9.07	19.37
TraesCS1D01G373000.1	Wheat	cytosol	8.93	18.66

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF228	SMART:SM00297	SUPFAM:SSF47370
EnsemblPlantsGene:TraesCS7D01G309100	EnsemblPlants:TraesCS7D01G309100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:392255658..392261558

Molecular Weight (calculated)

82964.0 Da

IEP (calculated)

4.631

GRAVY (calculated)

-0.713

Length

750 amino acids

Sequence
(BLAST)

001: MMGKTQKFSK GHPLGFVPDY RYGVETVGVS KGLGNPARSE AKRKCINLNT DEGADAPGFN VPRVVFELPR MSASDRNELE MRLRDELEQV RALQSRLFSR
101: GATTSMNGGT ASAPRGDFNG NKKDGKLRRS NSVQSGRGLP PSVAQPVVSS INYTASFKKC QELLKNLMKH RSASPFVMPV DPVKLCIPDY FDIVKHPMDL
201: GTIQKKLNAG VYPTPWEFAA DVRLTFSNAI LYNPVGNAVN IMAQTMSSVF EPRWKPIEKK LPRPDEELSA IEPSKNDAVE KNIVDNKEPF DRRPSNKGAY
301: KKNTFQKEEV VAKPVLHPKK RKASPLVQDA PVASVIQMAQ VAEEVPVVQT AMGMMTDEQK VALSVRLQSY GGFIPEHVVE FIKRHVNDDN DADEDELTID
401: MNALSDDTLF ELQKLLDDYD IVNQSGNPTK DEPQEVEFQS EYGLANSSMH HEGNELVEED IDIGGNDLPP LTYPPVVFES ETADRSSKHS SSSSSSSESG
501: SSSSGSDSSS SSGSDLGAKV PSANIGAKEN VLPVFSLDQE NDSQDTLNIQ EQCADRVPIS ADDEEENVSD KKYRAALLKS RFADTILKAR EKALDQVKDP
601: EKVRREREEL ERLQREERAR LQAEAKAAEE ARKRAEAAAA AEAAAEAKRQ REREREAARK ALQQMEKTVE INEGNLFLKD FEMLGTVTGE QNLNLVGEMS
701: PSHTPEPLGF QLGGNPLEQL GLYMKNDDEE DEEVESADEP TVDVEEGEID

Best Arabidopsis Sequence Match ( AT5G14270.1 )
(BLAST)

001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID

Arabidopsis Description

BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.