Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038624.1-P | Field mustard | nucleus | 36.54 | 92.56 |
| CDY13699 | Canola | nucleus | 31.0 | 41.58 |
| CDY16729 | Canola | nucleus | 76.51 | 41.07 |
| AT5G63320.1 | Thale cress | nucleus | 70.8 | 40.9 |
| CDY48139 | Canola | nucleus | 56.93 | 39.48 |
| CDX83673 | Canola | nucleus | 31.32 | 38.55 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 47.47 | 38.54 |
| Solyc03g111090.2.1 | Tomato | nucleus | 45.35 | 35.6 |
| KRH57199 | Soybean | nucleus | 42.25 | 35.05 |
| PGSC0003DMT400039290 | Potato | nucleus | 44.7 | 34.86 |
| KRH54219 | Soybean | nucleus | 44.21 | 34.39 |
| KRH63729 | Soybean | nucleus | 43.72 | 34.23 |
| TraesCS3A01G087800.1 | Wheat | plastid | 32.3 | 32.46 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 39.48 | 32.22 |
| KXG24325 | Sorghum | nucleus | 37.19 | 32.2 |
| CDY20057 | Canola | nucleus | 33.12 | 31.47 |
| GSMUA_Achr10P... | Banana | nucleus | 32.63 | 31.35 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 33.12 | 31.23 |
| Zm00001d035167_P001 | Maize | nucleus | 37.03 | 29.95 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 36.22 | 29.6 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 35.89 | 29.33 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 35.73 | 29.2 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 33.44 | 29.04 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 34.09 | 29.03 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 33.12 | 28.88 |
| Os02t0601800-03 | Rice | nucleus | 33.44 | 28.71 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 36.22 | 28.5 |
| TraesCS6B01G244000.2 | Wheat | plastid | 32.79 | 27.92 |
| EES07108 | Sorghum | nucleus | 32.3 | 27.85 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 32.46 | 27.83 |
| Zm00001d017126_P001 | Maize | nucleus | 31.48 | 27.73 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 32.14 | 27.51 |
| Zm00001d049638_P009 | Maize | nucleus | 34.75 | 27.41 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 31.81 | 27.35 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 31.81 | 27.27 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 31.65 | 27.21 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 31.65 | 27.21 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 30.83 | 26.54 |
| CDY15568 | Canola | nucleus | 13.38 | 25.87 |
| CDX82101 | Canola | nucleus | 7.67 | 25.68 |
| CDY08771 | Canola | nucleus | 14.52 | 25.14 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 26.75 | 25.08 |
| CDY43984 | Canola | endoplasmic reticulum | 17.78 | 24.94 |
| CDY66497 | Canola | nucleus | 6.2 | 24.52 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 27.41 | 23.83 |
| CDX78390 | Canola | nucleus | 9.14 | 23.43 |
| CDX70356 | Canola | nucleus, plastid | 9.14 | 22.67 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 19.9 | 22.1 |
| CDY26219 | Canola | nucleus | 6.2 | 20.43 |
| CDX83890 | Canola | nucleus, plastid | 11.42 | 19.13 |
| CDX96751 | Canola | nucleus, plastid | 11.26 | 18.85 |
| CDY26215 | Canola | mitochondrion | 12.56 | 18.6 |
| CDY19175 | Canola | nucleus, plastid | 11.58 | 18.49 |
| CDY65656 | Canola | cytosol | 6.04 | 17.87 |
| CDY65645 | Canola | nucleus, plastid | 14.68 | 17.68 |
| CDY48040 | Canola | nucleus, plastid | 11.09 | 17.35 |
| CDX82103 | Canola | plastid | 8.32 | 16.29 |
| CDY21732 | Canola | cytosol | 6.36 | 15.35 |
| CDY06203 | Canola | nucleus | 13.7 | 13.04 |
| CDY09981 | Canola | nucleus | 13.38 | 12.83 |
| CDY31648 | Canola | nucleus | 7.99 | 11.53 |
| CDX90608 | Canola | cytosol | 6.69 | 11.52 |
| CDX86532 | Canola | nucleus | 13.21 | 11.49 |
| CDX84278 | Canola | nucleus | 7.99 | 11.19 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 6.53 | 10.99 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 3.75 | 8.36 |
| CDY72432 | Canola | cytosol | 6.36 | 7.72 |
| CDX70357 | Canola | plastid | 4.89 | 7.63 |
| CDY68605 | Canola | cytosol | 6.36 | 7.1 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:35.1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDX84396 | ProteinID:CDX84396 |
| ProteinID:CDX84396.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00141568001 |
| InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:NET_dom | PFAM:PF00439 | PFAM:PF17035 |
| PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI0004EDC254 | SEG:seg | : | : | : |
Description
BnaC03g51040D
Coordinates
chrLK031837:-:761430..764920
Molecular Weight (calculated)
68780.9 Da
IEP (calculated)
4.348
GRAVY (calculated)
-0.943
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGTIRSRL RAGEYSSPLE FAADVRLTFS NSMAYNPPGN QYHKMARDLS AYFESRWKII ERKLPVVEPP VMSLTSSASL EFEVPCNVAP PRKITAAVNE
101: GKLRVEPGKL VMTDGEEFPQ NIVDLLREQS GSDDQSGEVE IEIEIDTLSD ETLFMVRKLL DEHLREKKKS LEKSEPCAME IVHDSGFSNS PLQPSKCDLL
201: IDEDVDIVGG NDPPVSSHPP FKIEKDAACR NSSSSSSSES GSSSSDSDSC SSSGSETDSI KVSNPTCTEE KKERGVGMKK KEDDNNGEKN VINESLNKLG
301: QVELDVEGKS TTMDAVHALP AEETAPPVRQ DSPGKRQRAA LLKNRFADTI MKAREKTLTK GENGDPEKLR IEREKFERRL REENARLQAE AKAAEEARRK
401: AEAEAAEKAR REREQEREAA RQALQKMEKT VEINEGRRFM EDLEMLRATG AEADQLPTFM KEMSPNMLGS FKMEGNSNPL EQLGLYMKMD EDEEDEPHFS
501: QGEVDEQPFD RKERLTLSPH VAEKEDQGLV NGSEGREEVV SEQAQDNWNQ EDEKLINQNE GKEQLENMPE QENGVEDKAD EKAEVMDEET QVGDIVEEEA
601: EVVDVDMVKV ERN
101: GKLRVEPGKL VMTDGEEFPQ NIVDLLREQS GSDDQSGEVE IEIEIDTLSD ETLFMVRKLL DEHLREKKKS LEKSEPCAME IVHDSGFSNS PLQPSKCDLL
201: IDEDVDIVGG NDPPVSSHPP FKIEKDAACR NSSSSSSSES GSSSSDSDSC SSSGSETDSI KVSNPTCTEE KKERGVGMKK KEDDNNGEKN VINESLNKLG
301: QVELDVEGKS TTMDAVHALP AEETAPPVRQ DSPGKRQRAA LLKNRFADTI MKAREKTLTK GENGDPEKLR IEREKFERRL REENARLQAE AKAAEEARRK
401: AEAEAAEKAR REREQEREAA RQALQKMEKT VEINEGRRFM EDLEMLRATG AEADQLPTFM KEMSPNMLGS FKMEGNSNPL EQLGLYMKMD EDEEDEPHFS
501: QGEVDEQPFD RKERLTLSPH VAEKEDQGLV NGSEGREEVV SEQAQDNWNQ EDEKLINQNE GKEQLENMPE QENGVEDKAD EKAEVMDEET QVGDIVEEEA
601: EVVDVDMVKV ERN
0001: MGKARKHSRG RPSGFVPDYM QAVEPDEFVY SERMNSEASP PLKRRRFGLN GDNNGVSKEV LSLSKMSRSE RKNLVHKLKM ELQQVRDLSK KIASFSSDTV
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D
Arabidopsis Description
GTE10NPX1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.