Factsheet for HORVU3Hr1G015760.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G083410.1
HORVU2Hr1G083430.3
HORVU2Hr1G083490.1
HORVU3Hr1G092090.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01770.1	HORVU2Hr1G083410.1	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083430.3	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083490.1	AT3G48360.1	15316289
AT3G01770.1	HORVU3Hr1G092090.3	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083410.1	AT5G63160.1	15316289
AT3G01770.1	HORVU2Hr1G083430.3	AT5G63160.1	15316289
AT3G01770.1	HORVU2Hr1G083490.1	AT5G63160.1	15316289
AT3G01770.1	HORVU3Hr1G092090.3	AT5G63160.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G087900.4	Wheat	nucleus	91.85	70.81
TraesCS3B01G103200.2	Wheat	nucleus	91.49	70.63
TraesCS3A01G087800.1	Wheat	plastid	72.83	65.9
HORVU6Hr1G054560.16	Barley	nucleus	84.42	65.17
HORVU3Hr1G022660.1	Barley	nucleus	81.88	63.48
Os02t0601800-03	Rice	nucleus	78.08	60.36
Zm00001d017126_P001	Maize	nucleus	74.09	58.76
EES07108	Sorghum	nucleus	74.64	57.95
Bra038624.1-P	Field mustard	nucleus	18.12	41.32
GSMUA_Achr8P08920_001	Banana	nucleus	39.67	33.69
VIT_17s0000g01830.t01	Wine grape	nucleus	41.67	30.46
GSMUA_Achr8P01140_001	Banana	nucleus	41.12	30.23
GSMUA_Achr10P...	Banana	nucleus	34.42	29.78
VIT_14s0171g00380.t01	Wine grape	nucleus	38.41	28.77
KRH63729	Soybean	nucleus	40.58	28.61
KRH54219	Soybean	nucleus	39.49	27.66
GSMUA_Achr3P02670_001	Banana	nucleus	34.78	27.23
KRH57199	Soybean	nucleus	36.41	27.2
GSMUA_Achr3P02660_001	Banana	plasma membrane	31.88	26.91
KRH07021	Soybean	nucleus	36.23	26.88
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	11.05	26.75
Solyc03g111090.2.1	Tomato	nucleus	37.5	26.5
KRG94435	Soybean	nucleus	35.51	26.42
GSMUA_Achr2P20970_001	Banana	nucleus	34.42	26.39
PGSC0003DMT400039290	Potato	nucleus	37.32	26.21
PGSC0003DMT400052108	Potato	nucleus	34.42	26.06
Bra039088.1-P	Field mustard	nucleus	30.43	25.81
Bra025262.1-P	Field mustard	nucleus	25.18	25.69
CDY20057	Canola	nucleus	29.89	25.58
Solyc02g093880.2.1	Tomato	nucleus	33.15	25.24
AT5G14270.2	Thale cress	nucleus	30.98	24.82
AT3G01770.1	Thale cress	nucleus	27.54	24.52
KRH07022	Soybean	nucleus	34.06	23.92
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	33.15	23.49
AT3G27260.3	Thale cress	nucleus	32.79	22.02
CDX84396	Canola	nucleus	22.1	19.9
HORVU5Hr1G097840.6	Barley	cytosol	12.5	19.71
HORVU7Hr1G018300.6	Barley	cytosol	12.14	19.03
HORVU6Hr1G045030.1	Barley	nucleus	21.56	18.8
HORVU6Hr1G045070.4	Barley	nucleus	21.56	18.71
AT5G63320.1	Thale cress	nucleus	34.24	17.81
CDY13699	Canola	nucleus	14.67	17.72
CDX83673	Canola	nucleus	14.67	16.27
CDY48139	Canola	nucleus	24.09	15.05
CDY16729	Canola	nucleus	26.81	12.96
Bra035848.1-P	Field mustard	nucleus	26.81	12.43
HORVU7Hr1G118300.1	Barley	cytosol	15.94	12.36

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	UniProt:A0A287K7X6	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	EnsemblPlantsGene:HORVU3Hr1G015760	EnsemblPlants:HORVU3Hr1G015760.1
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF231	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI000B478E83	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:+:37301453..37307906

Molecular Weight (calculated)

61012.9 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.622

Length

552 amino acids

Sequence
(BLAST)

001: MTPTVLMEYR PQMQIKRGYD EIAYQGAGYA ETVGESGSPV RVDSEDSSAP KRKCISLNSD GFDVKREIFV PSKLSSSERR YLRKRFRAEL DSVRYLLKRP
101: EFLAIMPVSR APGFSSSAAP RAKKVQRGSH VLRGAKGRFL PTKPRPETST VLPEATILKQ CEAILKKLMT QKFSHIFNVP VDVEKLNIPD YNEIIKHPMD
201: LGTIKKKLDS GSYTSPSDFA ADVRLTFNNA ITYNPRGHAV HDMAIQLNKM FESRWKTVEK KLASAAIKPH VEVDRADSKR RKTPPVDRSD LSIDCVRPTE
301: IVKPKMTFEE KESFGNCLAS LSEDPELPGH IIDMLQQCID NNTDQLGDGE IEIDIHALSD DMLLELKKHV DKYLQERDHQ QTKSEPSENE AVNVSGLSHS
401: STNPCKGGEP VEEDVDICGN ASPILIEKDP EIRTSKCGSP SSSSSDSGSS SSDSDSGSDA ESEPEKAGSP AKLVKGIKIP EQPAEQEKSD AGISPVDANH
501: AAADVELREQ DNESKAATGG KHLCVPVPFF PTSHHLHHVF YNFGDYRALI SL

Best Arabidopsis Sequence Match ( AT3G27260.1 )
(BLAST)

001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPKPDE TSTERPLDAL GSFKLGECNP LEQLGLYMKQ DDGEEEEPEA PVVPKPNETS LERPVDAFGS FNLKGSNPLE QLGLYMKQDD DEEEPEAPAV
801: PNLANDVEEG EID

Arabidopsis Description

GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.