Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P08920_001 | Banana | nucleus | 67.11 | 77.54 |
| GSMUA_Achr10P... | Banana | nucleus | 47.14 | 55.49 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 55.39 | 55.1 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 52.86 | 53.87 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 50.07 | 52.22 |
| KRH63729 | Soybean | nucleus | 54.33 | 52.11 |
| KRH54219 | Soybean | nucleus | 53.79 | 51.27 |
| KRH57199 | Soybean | nucleus | 50.2 | 51.01 |
| Solyc03g111090.2.1 | Tomato | nucleus | 52.46 | 50.45 |
| KRH07021 | Soybean | nucleus | 49.93 | 50.4 |
| PGSC0003DMT400039290 | Potato | nucleus | 52.73 | 50.38 |
| KRG94435 | Soybean | nucleus | 49.4 | 50.0 |
| Bra025262.1-P | Field mustard | nucleus | 35.82 | 49.72 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 49.13 | 49.2 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 48.87 | 48.93 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 48.47 | 48.53 |
| PGSC0003DMT400052108 | Potato | nucleus | 45.81 | 47.19 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 48.73 | 46.98 |
| Bra039088.1-P | Field mustard | nucleus | 40.61 | 46.85 |
| CDY20057 | Canola | nucleus | 40.21 | 46.82 |
| Os02t0601800-03 | Rice | nucleus | 44.47 | 46.78 |
| Solyc02g093880.2.1 | Tomato | nucleus | 45.14 | 46.76 |
| AT5G14270.2 | Thale cress | nucleus | 42.61 | 46.44 |
| TraesCS3A01G087800.1 | Wheat | plastid | 37.42 | 46.07 |
| Zm00001d035167_P001 | Maize | nucleus | 46.47 | 46.04 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 42.88 | 45.8 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 39.81 | 45.72 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 43.28 | 45.39 |
| AT3G01770.1 | Thale cress | nucleus | 37.42 | 45.32 |
| CDY13699 | Canola | nucleus | 27.56 | 45.3 |
| KXG24325 | Sorghum | nucleus | 42.61 | 45.2 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 42.48 | 45.18 |
| EES07108 | Sorghum | nucleus | 42.74 | 45.15 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 42.88 | 45.03 |
| KRH07022 | Soybean | nucleus | 47.0 | 44.91 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 42.61 | 44.76 |
| TraesCS6B01G244000.2 | Wheat | plastid | 42.74 | 44.58 |
| Zm00001d017126_P001 | Maize | nucleus | 41.01 | 44.25 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 41.94 | 44.18 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 41.94 | 44.18 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 41.81 | 44.04 |
| Zm00001d049638_P009 | Maize | nucleus | 45.14 | 43.63 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 41.15 | 43.4 |
| Bra038624.1-P | Field mustard | nucleus | 13.98 | 43.39 |
| CDX83673 | Canola | nucleus | 28.1 | 42.37 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 39.41 | 41.99 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 30.23 | 41.12 |
| AT3G27260.3 | Thale cress | nucleus | 43.41 | 39.66 |
| CDX84396 | Canola | nucleus | 32.22 | 39.48 |
| AT5G63320.1 | Thale cress | nucleus | 44.34 | 31.39 |
| CDY48139 | Canola | nucleus | 36.75 | 31.22 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 17.84 | 29.98 |
| GSMUA_Achr1P15650_001 | Banana | nucleus | 17.98 | 27.44 |
| GSMUA_Achr3P00480_001 | Banana | nucleus | 18.91 | 27.2 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 23.7 | 26.41 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 17.98 | 26.32 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 17.71 | 25.88 |
| GSMUA_Achr11P... | Banana | nucleus | 14.51 | 25.77 |
| CDY16729 | Canola | nucleus | 37.42 | 24.61 |
| Bra035848.1-P | Field mustard | nucleus | 37.42 | 23.59 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 10.39 | 19.95 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 9.32 | 16.28 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr8G01140_001 | EnsemblPlants:GSMUA_Achr8P01140_001 | EnsemblPlants:GSMUA_Achr8T01140_001 |
| InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | UniProt:M0TLL6 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0002948529 |
| SEG:seg | : | : | : | : | : |
Description
Putative bromodomain domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G01140_001]
Coordinates
chr8:+:944949..953099
Molecular Weight (calculated)
83152.3 Da
IEP (calculated)
5.072
GRAVY (calculated)
-0.745
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKAQKFSKG YPSGFGPDYH HVGDTMGESE GFGSCGRAGS EDSSAPKRKC ISLNADRCDK FDIPFELFSL SKMSRSEKKD LEVRLRRELE QVRMFQKKML
101: SSNATGTNGV AFSSSSDGYV KKGDPLGQNG SNLKCVNSGK FEMAKKVQHT NIISNPYSIL MKQCETLLKR LMSHQYGWVF NTPVDVVKLN IPDYSQVIKH
201: PMDLGTIKTR IGLGSYSSPW DFVSDVRLTF TNAKTYNPPG NDVHIMADTM SKFFETRWKP IEKKLVAADA AASKEAETPK PVLRPNKRKS PPHNNNIILP
301: EDVRPKMTIE EKQSLSRRLA SLGDMPEHMV NFLRRNNAVS HTSEDEIELD LDAMSDDLLF ELRKLLEEYC LGERLRVQAK AETYEVEILN ESGLSNSSMH
401: ACKGNEPAEE DVDIVGNDPP VSSYPPVVIE KDAMLRSGKC SSSNSSSSDS GSSSSDSDSG SSSESESDNK VTSPKKDMKK SILSGQALDQ EISDLSNPRD
501: GNRTSEGTNQ QEQVAHPKPE SVVIEQNREG DNAPSERQFS PEKLYRAAIL KSRFADTILK AREKTLDQGE SRDPEKLRRE REELERQKRE ERARLQAEAK
601: AAEEARRLVE AEAAAQAAAE AKRKRELERE AARQALLQAS IVFGIHSLCG ICSLVALTSC DTQMEKTVEI NESSVFLKDL EILRTAPGEH LPSSVGETSP
701: DRSPEGISGF QLGGSNPLEQ LGLYMKADDE EDEEVEPNSA TANDAEEGEI D
101: SSNATGTNGV AFSSSSDGYV KKGDPLGQNG SNLKCVNSGK FEMAKKVQHT NIISNPYSIL MKQCETLLKR LMSHQYGWVF NTPVDVVKLN IPDYSQVIKH
201: PMDLGTIKTR IGLGSYSSPW DFVSDVRLTF TNAKTYNPPG NDVHIMADTM SKFFETRWKP IEKKLVAADA AASKEAETPK PVLRPNKRKS PPHNNNIILP
301: EDVRPKMTIE EKQSLSRRLA SLGDMPEHMV NFLRRNNAVS HTSEDEIELD LDAMSDDLLF ELRKLLEEYC LGERLRVQAK AETYEVEILN ESGLSNSSMH
401: ACKGNEPAEE DVDIVGNDPP VSSYPPVVIE KDAMLRSGKC SSSNSSSSDS GSSSSDSDSG SSSESESDNK VTSPKKDMKK SILSGQALDQ EISDLSNPRD
501: GNRTSEGTNQ QEQVAHPKPE SVVIEQNREG DNAPSERQFS PEKLYRAAIL KSRFADTILK AREKTLDQGE SRDPEKLRRE REELERQKRE ERARLQAEAK
601: AAEEARRLVE AEAAAQAAAE AKRKRELERE AARQALLQAS IVFGIHSLCG ICSLVALTSC DTQMEKTVEI NESSVFLKDL EILRTAPGEH LPSSVGETSP
701: DRSPEGISGF QLGGSNPLEQ LGLYMKADDE EDEEVEPNSA TANDAEEGEI D
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGLASVG GLDQLESASP EKISSVEADC QQDGNSAQNE
501: KQLPPEKSYR AAILKNRFAD IILKAREKPL NQNDTRDPEK LQREREELEL QKKKEKARLQ AEAKAAEEAR RKAEAQAAAE AAAEAKRKLE LEREAARQAL
601: MEMEQSVELN ENAKFLEDLE LLKTVDTDHL TNTIEEEDGP DVGLRSFSFG GSNPLEQLGL FMKQDEDEEE ADPLTSPAPE IDIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGLASVG GLDQLESASP EKISSVEADC QQDGNSAQNE
501: KQLPPEKSYR AAILKNRFAD IILKAREKPL NQNDTRDPEK LQREREELEL QKKKEKARLQ AEAKAAEEAR RKAEAQAAAE AAAEAKRKLE LEREAARQAL
601: MEMEQSVELN ENAKFLEDLE LLKTVDTDHL TNTIEEEDGP DVGLRSFSFG GSNPLEQLGL FMKQDEDEEE ADPLTSPAPE IDIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.