Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0138000-01 | Rice | cytosol, nucleus | 18.93 | 59.68 |
| KRH04734 | Soybean | nucleus | 55.75 | 57.52 |
| Solyc09g015660.2.1 | Tomato | cytosol | 51.92 | 56.23 |
| Solyc09g090370.2.1 | Tomato | nucleus | 49.36 | 55.78 |
| VIT_13s0019g03950.t01 | Wine grape | nucleus | 54.73 | 55.44 |
| PGSC0003DMT400044321 | Potato | nucleus | 51.66 | 53.58 |
| EER87804 | Sorghum | nucleus | 47.06 | 53.18 |
| TraesCS7A01G080900.1 | Wheat | nucleus | 47.57 | 52.99 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 47.57 | 52.99 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 47.06 | 52.42 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 46.8 | 52.29 |
| TraesCS1A01G367300.1 | Wheat | cytosol | 46.29 | 51.86 |
| TraesCS1B01G385900.1 | Wheat | cytosol | 45.27 | 51.75 |
| KRH37141 | Soybean | cytosol, nucleus | 35.81 | 51.28 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 46.04 | 51.14 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 56.01 | 50.93 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 46.04 | 50.14 |
| KRH45305 | Soybean | nucleus | 46.8 | 49.86 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 46.29 | 49.59 |
| Bra012810.1-P | Field mustard | cytosol | 41.43 | 45.51 |
| CDX90608 | Canola | cytosol | 40.92 | 44.94 |
| KRH12139 | Soybean | nucleus | 39.9 | 44.7 |
| AT2G34900.1 | Thale cress | nucleus | 43.73 | 44.3 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 40.92 | 43.96 |
| AT3G52280.2 | Thale cress | nucleus | 42.71 | 43.26 |
| Bra005383.1-P | Field mustard | nucleus | 41.43 | 42.08 |
| CDY31648 | Canola | nucleus | 41.94 | 38.59 |
| CDX84278 | Canola | nucleus | 41.69 | 37.21 |
| Bra034451.1-P | Field mustard | cytosol | 38.11 | 28.22 |
| GSMUA_Achr11P... | Banana | nucleus | 22.25 | 20.57 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 22.76 | 19.91 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 22.76 | 17.35 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 22.25 | 16.93 |
| GSMUA_Achr3P00480_001 | Banana | nucleus | 21.48 | 16.09 |
| GSMUA_Achr1P15650_001 | Banana | nucleus | 19.69 | 15.65 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 19.95 | 12.0 |
| GSMUA_Achr10P... | Banana | nucleus | 18.41 | 11.29 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 18.16 | 10.86 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 19.95 | 10.39 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 17.65 | 10.24 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 17.65 | 9.79 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 17.9 | 9.72 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G29340_001 | EnsemblPlants:GSMUA_Achr8P29340_001 | EnsemblPlants:GSMUA_Achr8T29340_001 | InterPro:GTE1/GTE6 | InterPro:IPR001487 |
| InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | UniProt:M0TUN7 | InterPro:NET_dom | InterPro:NET_sf |
| PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 |
| PANTHER:PTHR22880:SF163 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI000295EDF0 | SEG:seg | : |
Description
Transcription factor GTE6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G29340_001]
Coordinates
chr8:+:31756873..31761428
Molecular Weight (calculated)
43725.1 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.719
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSQGAAV VALRPPQPPL ASGNGSDAGV AVEAGNPKTD VERFRHRVDE YISKANELEQ KVNEVVEYYA NRKQPNNSKG NSGGKDKEKK KPGNSGSNNS
101: GNKLIDGSRK EAVCTKRMQE LMRQFGCNSF LVITQHKWAR PFMNPVDVKG LGLDDYYEVI KKPMDFGTIK NQMEAKDGNG YKNVREIYAD VRLVFTNAMT
201: YNDDRSDIHV MAKTLLDKFE EKWLQLLPKV VEEEAKQKDD EAQALANMQI AREAAFGKMA RDTNSELDEL NARLEELRKL VIQKCRKMSA EEKRKLGVGL
301: SALSPEDLNK ALEIIAEDNP SFQTTGEVVD VDMDAQSEIT LWKVKFFVKG ALELQAKNCA SKADDNLKRK KEICDALAKT ARKRNKKLSS L
101: GNKLIDGSRK EAVCTKRMQE LMRQFGCNSF LVITQHKWAR PFMNPVDVKG LGLDDYYEVI KKPMDFGTIK NQMEAKDGNG YKNVREIYAD VRLVFTNAMT
201: YNDDRSDIHV MAKTLLDKFE EKWLQLLPKV VEEEAKQKDD EAQALANMQI AREAAFGKMA RDTNSELDEL NARLEELRKL VIQKCRKMSA EEKRKLGVGL
301: SALSPEDLNK ALEIIAEDNP SFQTTGEVVD VDMDAQSEIT LWKVKFFVKG ALELQAKNCA SKADDNLKRK KEICDALAKT ARKRNKKLSS L
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.