Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G385900.1 | Wheat | cytosol | 91.4 | 93.27 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 94.84 | 92.2 |
| TraesCS7A01G080900.1 | Wheat | nucleus | 77.36 | 76.92 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 77.08 | 76.64 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 25.21 | 70.97 |
| EER87804 | Sorghum | nucleus | 65.9 | 66.47 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 65.33 | 62.47 |
| KRH04734 | Soybean | nucleus | 53.01 | 48.81 |
| Solyc09g015660.2.1 | Tomato | cytosol | 49.86 | 48.2 |
| Solyc09g090370.2.1 | Tomato | nucleus | 46.42 | 46.82 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 51.86 | 46.29 |
| VIT_13s0019g03950.t01 | Wine grape | nucleus | 51.0 | 46.11 |
| PGSC0003DMT400044321 | Potato | nucleus | 49.0 | 45.36 |
| KRH37141 | Soybean | cytosol, nucleus | 33.81 | 43.22 |
| KRH45305 | Soybean | nucleus | 44.99 | 42.78 |
| Bra012810.1-P | Field mustard | cytosol | 43.55 | 42.7 |
| CDX90608 | Canola | cytosol | 42.98 | 42.13 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 43.84 | 42.03 |
| AT2G34900.1 | Thale cress | nucleus | 44.7 | 40.41 |
| KRH12139 | Soybean | nucleus | 40.4 | 40.4 |
| Bra005383.1-P | Field mustard | nucleus | 43.84 | 39.74 |
| AT3G52280.2 | Thale cress | nucleus | 43.27 | 39.12 |
| CDY31648 | Canola | nucleus | 44.7 | 36.71 |
| CDX84278 | Canola | nucleus | 44.7 | 35.62 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 40.97 | 33.26 |
| Bra034451.1-P | Field mustard | cytosol | 40.69 | 26.89 |
| TraesCS3A01G234100.1 | Wheat | cytosol, nucleus, plastid | 13.75 | 22.33 |
| TraesCS3A01G234600.1 | Wheat | cytosol, nucleus, plastid | 13.75 | 22.33 |
| TraesCS3A01G234000.1 | Wheat | cytosol | 14.04 | 22.27 |
| TraesCS3A01G234500.1 | Wheat | cytosol | 13.75 | 21.82 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 22.35 | 15.29 |
| TraesCS2A01G466700.3 | Wheat | cytosol, mitochondrion, nucleus, plastid | 20.34 | 15.2 |
| TraesCS3A01G087800.1 | Wheat | plastid | 18.34 | 10.49 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 16.33 | 10.38 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 19.48 | 9.63 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 19.48 | 9.54 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 18.34 | 8.53 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:GTE1/GTE6 | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 | SMART:SM00297 | SUPFAM:SSF47370 | EnsemblPlantsGene:TraesCS1A01G367300 |
| EnsemblPlants:TraesCS1A01G367300.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:545888238..545891353
Molecular Weight (calculated)
39604.9 Da
IEP (calculated)
5.927
GRAVY (calculated)
-0.717
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVVRGAAVE GAWSLPAPME PTAAADGPQV SEVDSFRRQV DDLLSKTDVL EKRVNEVVGF YNNKKHSSGG RKAGGRYAAN GARDSHGNGM PDLMRQFAGI
101: IRQITSHEWA QPFLQPVDVV GLQLDDYHQI ITKPMDFSTI RNKMEGKEST TYNSVREIYS DVRLVFTNAM KYNDVGHPVH IMAKFLLERF EEKWLHLLPK
201: VENEEREHEE PNDAPTKNIS PEAAIAKLAE DTGNELNEIN KQLEELQKMV VQRCRKMTTN EKRKLGAGLC QLSPEDLNKA LELVAQDNPS FQTTAEEVDL
301: DMDAQSETTL WRLKFFVREA LEQQANENTK RKNDMYNALA KTDSKRIKR
101: IRQITSHEWA QPFLQPVDVV GLQLDDYHQI ITKPMDFSTI RNKMEGKEST TYNSVREIYS DVRLVFTNAM KYNDVGHPVH IMAKFLLERF EEKWLHLLPK
201: VENEEREHEE PNDAPTKNIS PEAAIAKLAE DTGNELNEIN KQLEELQKMV VQRCRKMTTN EKRKLGAGLC QLSPEDLNKA LELVAQDNPS FQTTAEEVDL
301: DMDAQSETTL WRLKFFVREA LEQQANENTK RKNDMYNALA KTDSKRIKR
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.