Factsheet for Solyc09g015660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04734	Soybean	nucleus	71.19	67.81
Solyc09g090370.2.1	Tomato	nucleus	62.88	65.61
VIT_13s0019g03950.t01	Wine grape	nucleus	69.81	65.28
Bra012810.1-P	Field mustard	cytosol	53.46	54.21
CDX90608	Canola	cytosol	53.19	53.93
EER87804	Sorghum	nucleus	50.42	52.6
CDY29075	Canola	cytoskeleton, cytosol, nucleus	52.91	52.47
Os06t0138000-01	Rice	cytosol, nucleus	18.01	52.42
GSMUA_Achr8P29340_001	Banana	nucleus	56.23	51.92
TraesCS1B01G385900.1	Wheat	cytosol	48.2	50.88
TraesCS4A01G377900.2	Wheat	cytosol	49.31	50.71
TraesCS7D01G074500.1	Wheat	cytosol	49.03	50.43
TraesCS7A01G080900.1	Wheat	nucleus	49.03	50.43
AT3G52280.2	Thale cress	nucleus	53.46	50.0
HORVU5Hr1G097840.6	Barley	cytosol	48.48	50.0
TraesCS1A01G367300.1	Wheat	cytosol	48.2	49.86
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	49.86	49.32
HORVU7Hr1G018300.6	Barley	cytosol	47.65	48.86
TraesCS1D01G373000.1	Wheat	cytosol	47.65	47.91
GSMUA_Achr8P34430_001	Banana	nucleus	46.54	39.07
Solyc12g014170.1.1	Tomato	nucleus	25.48	13.12
Solyc01g106280.2.1	Tomato	nucleus	21.88	13.12
Solyc02g091660.2.1	Tomato	nucleus	19.39	13.08
Solyc07g062660.2.1	Tomato	nucleus	26.32	12.63
Solyc02g071510.2.1	Tomato	nucleus	20.5	12.61
Solyc02g093880.2.1	Tomato	nucleus	21.05	10.48
Solyc03g111090.2.1	Tomato	nucleus	22.44	10.37
Solyc10g008070.2.1	Tomato	nucleus	9.97	9.94

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006338	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0019538	InterPro:GTE1/GTE6	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	UniProt:K4CS36	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035
PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF163	SMART:SM00297
SUPFAM:SSF47370	EnsemblPlantsGene:Solyc09g015660.2	EnsemblPlants:Solyc09g015660.2.1	UniParc:UPI000276BF17	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:10656313..10667870

Molecular Weight (calculated)

41470.3 Da

IEP (calculated)

7.610

GRAVY (calculated)

-0.768

Length

361 amino acids

Sequence
(BLAST)

001: MDGFRCTVDE LVMNIDKLEQ RVNEVENFYL NTSIKQPNTS KNASSAKHKD KDKHVPGFKK LQQEASRREA AAAKRMQELM RQFGTILRQI TQHKWAWPFM
101: QPVDVKGLGL HDYYEIIDRP MDFSTIKNQM EATDGTGYKH VREISADVRL VFKNAMKYND DKSDVHLMAK TLLEKFEEKW IQLLPKVNEE EKRREEEEAE
201: AQLNMQFAQE SAHAKLARDL CNELYEVDTH VEELREMVVR RCRKISIEEK RNLGIALTKL SPDDLSKALE IVAQNNPLFP ASAEEVELDI DAQSELTLWR
301: LKFFTKDALE VDGKSSSKGD NSNSANVAAT NPNISAASGR KREICDALVK NAKKRNKKPS R

Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)

001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA

Arabidopsis Description

GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.