Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87804 | Sorghum | nucleus | 79.84 | 28.61 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 76.61 | 27.07 |
| TraesCS7A01G080900.1 | Wheat | nucleus | 76.61 | 27.07 |
| TraesCS1B01G385900.1 | Wheat | cytosol | 74.19 | 26.9 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 75.81 | 26.86 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 79.03 | 26.85 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 75.81 | 26.78 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 74.19 | 26.14 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 75.0 | 25.91 |
| TraesCS1A01G367300.1 | Wheat | cytosol | 70.97 | 25.21 |
| KRH04734 | Soybean | nucleus | 58.06 | 19.0 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 59.68 | 18.93 |
| VIT_13s0019g03950.t01 | Wine grape | nucleus | 57.26 | 18.39 |
| Solyc09g015660.2.1 | Tomato | cytosol | 52.42 | 18.01 |
| Solyc09g090370.2.1 | Tomato | nucleus | 47.58 | 17.05 |
| PGSC0003DMT400044321 | Potato | nucleus | 50.0 | 16.45 |
| AT2G34900.1 | Thale cress | nucleus | 50.81 | 16.32 |
| Bra005383.1-P | Field mustard | nucleus | 49.19 | 15.84 |
| CDY31648 | Canola | nucleus | 49.19 | 14.35 |
| Bra012810.1-P | Field mustard | cytosol | 40.32 | 14.04 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 41.13 | 14.01 |
| CDX84278 | Canola | nucleus | 49.19 | 13.93 |
| CDX90608 | Canola | cytosol | 39.52 | 13.76 |
| KRH45305 | Soybean | nucleus | 40.32 | 13.62 |
| AT3G52280.2 | Thale cress | nucleus | 40.32 | 12.95 |
| KRH12139 | Soybean | nucleus | 31.45 | 11.17 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 13.71 | 10.24 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 35.48 | 10.23 |
| KRH37141 | Soybean | cytosol, nucleus | 20.16 | 9.16 |
| Bra034451.1-P | Field mustard | cytosol | 37.1 | 8.71 |
| Os04t0622800-00 | Rice | cytosol | 21.77 | 8.68 |
| Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 23.39 | 6.36 |
| Os08t0192800-01 | Rice | nucleus | 20.16 | 5.2 |
| Os01t0648700-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 8.87 | 4.62 |
| Os02t0250300-01 | Rice | nucleus | 23.39 | 4.42 |
| Os02t0601800-03 | Rice | nucleus | 22.58 | 3.92 |
| Os07t0507700-01 | Rice | nucleus | 11.29 | 2.33 |
| Os08t0127300-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1270.220 | MapMan:35.1 | ProteinID:BAF18650.1 | ProteinID:BAS96053.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:GTE1/GTE6 | InterPro:IPR027353 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | EnsemblPlantsGene:Os06g0138000 |
| EnsemblPlants:Os06t0138000-01 | PFAM:PF17035 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 | UniProt:Q0DES3 |
| UniParc:UPI0000E12673 | : | : | : | : | : |
Description
Similar to IMB1. (Os06t0138000-01)
Coordinates
chr6:+:2027183..2027943
Molecular Weight (calculated)
14293.2 Da
IEP (calculated)
8.892
GRAVY (calculated)
-0.798
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: LIEINKQLEE LRQMVVQKCR KMTTYEKRKL GAGLCHLSPE ELTKALEMVA QDNPSFEAKG DELELDMDAQ SETTLWRLKF FVREALERQA NVASGRTDEN
101: AKRKREICNA LARTASKRVK QQPN
101: AKRKREICNA LARTASKRVK QQPN
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.