Factsheet for Os01t0648700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	50.0	55.09
KXG33001	Sorghum	plastid	52.1	54.63
TraesCS3A01G234600.1	Wheat	cytosol, nucleus, plastid	48.74	53.95
TraesCS3A01G234100.1	Wheat	cytosol, nucleus, plastid	48.74	53.95
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	47.9	53.02
TraesCS3A01G234000.1	Wheat	cytosol	48.32	52.27
TraesCS3A01G234500.1	Wheat	cytosol	47.9	51.82
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	47.48	50.9
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	46.64	50.45
TraesCS5B01G052900.1	Wheat	plastid	48.32	48.32
Os04t0622800-00	Rice	cytosol	28.57	21.86
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	30.25	15.79
Os08t0192800-01	Rice	nucleus	30.25	14.97
Os02t0250300-01	Rice	nucleus	35.29	12.8
Os01t0214300-01	Rice	cytosol, nucleus	6.3	9.04
Os07t0507700-01	Rice	nucleus	22.69	8.99
Os06t0138000-01	Rice	cytosol, nucleus	4.62	8.87
Os02t0601800-03	Rice	nucleus	26.05	8.68
Os08t0127300-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:4326247	ProteinID:BAD68333.1	ProteinID:BAF05629.2
ProteinID:BAS73426.1	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf
EnsemblPlantsGene:Os01g0648700	EnsemblPlants:Os01t0648700-01	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	UniProt:Q5VQE7	SMART:SM00297	SUPFAM:SSF47370
UniParc:UPI0000457E1B	RefSeq:XP_015635281.1	SEG:seg	:	:	:

Description

Bromodomain containing protein. (Os01t0648700-01)

Coordinates

chr1:-:26173196..26177230

Molecular Weight (calculated)

26207.5 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.385

Length

238 amino acids

Sequence
(BLAST)

001: MPRPKRRRSP LPPPAPPGFP TERKHHLPEL QPPAVAAASP GVAGVPADLG DALLRCGKLL DKLLEHEDGW VFAEPVDARA LRLVDYYLRI SDPMDLGTVR
101: RRLERRRYAD PWAFAADVRL TFNNAMSYNS AGDPVYESAA ELSEIFEAGW PSVLAAPPRP PDAERKRRLS GLLPRLPVGA QVTVAEIMKK RDGCLREVNG
201: MMEVDLDRAD SATLDELDRM VAEHGAALAG VVKVKQEP

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.