Factsheet for TraesCS3A01G234000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G234500.1	Wheat	cytosol	95.0	95.0
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	91.36	91.36
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	89.09	88.29
TraesCS3A01G234600.1	Wheat	cytosol, nucleus, plastid	82.73	84.65
TraesCS3A01G234100.1	Wheat	cytosol, nucleus, plastid	82.73	84.65
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	52.27	48.32
KXG33001	Sorghum	plastid	44.09	42.73
TraesCS3A01G140500.1	Wheat	nucleus, plastid	35.45	15.29
TraesCS1A01G367300.1	Wheat	cytosol	22.27	14.04
TraesCS4A01G377900.2	Wheat	cytosol	22.27	13.96
TraesCS7A01G080900.1	Wheat	nucleus	22.27	13.96
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	28.64	13.49
TraesCS7A01G539800.2	Wheat	nucleus, plastid	23.18	9.29
TraesCS3A01G087800.1	Wheat	plastid	24.09	8.69
TraesCS3A01G122200.1	Wheat	nucleus	26.82	8.27
TraesCS6A01G214000.1	Wheat	nucleus	25.91	8.07
TraesCS7A01G312700.2	Wheat	nucleus	26.82	7.87

Protein Annotations

EnsemblPlants:TraesCS3A01G234000.1	EnsemblPlantsGene:TraesCS3A01G234000	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147
PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	SEG:seg	SMART:SM00297	SUPFAM:SSF47370
MapMan:15.5.54	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:437645391..437649530

Molecular Weight (calculated)

24790.5 Da

IEP (calculated)

5.808

GRAVY (calculated)

-0.441

Length

220 amino acids

Sequence
(BLAST)

001: MASQSSPAGA PPGFPKPANY LAAVDLPRAL ERCRVLLDEL LQHEDGWVFA KPVDTYELGL CDYHSEIRQP MDLGTVRRRL ERRRYQNPLC FASDVRHTFR
101: NAMTYNYKGD DVYKTADVLS RIFESGWASI SATLQSPPPV AERRARLKDE LPRLPVELQY KAAVIMKDVG GWIQEVDGRV EVDLDKADEA TLDKLEWLLA
201: LATMRKEAGV LDNQTRSGAA

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.