Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G080900.1 | Wheat | nucleus | 97.15 | 97.15 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 96.58 | 96.58 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 93.73 | 94.0 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 93.73 | 93.47 |
| TraesCS1A01G367300.1 | Wheat | cytosol | 76.64 | 77.08 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 27.07 | 76.61 |
| EER87804 | Sorghum | nucleus | 69.23 | 70.23 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 69.8 | 67.12 |
| Solyc09g015660.2.1 | Tomato | cytosol | 50.71 | 49.31 |
| KRH04734 | Soybean | nucleus | 52.71 | 48.81 |
| Solyc09g090370.2.1 | Tomato | nucleus | 47.58 | 48.27 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 52.99 | 47.57 |
| VIT_13s0019g03950.t01 | Wine grape | nucleus | 51.85 | 47.15 |
| PGSC0003DMT400044321 | Potato | nucleus | 50.14 | 46.68 |
| KRH37141 | Soybean | cytosol, nucleus | 34.19 | 43.96 |
| KRH45305 | Soybean | nucleus | 44.73 | 42.78 |
| KRH12139 | Soybean | nucleus | 41.31 | 41.55 |
| Bra012810.1-P | Field mustard | cytosol | 41.88 | 41.29 |
| CDX90608 | Canola | cytosol | 41.31 | 40.73 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 41.6 | 40.11 |
| AT2G34900.1 | Thale cress | nucleus | 43.87 | 39.9 |
| Bra005383.1-P | Field mustard | nucleus | 43.59 | 39.74 |
| AT3G52280.2 | Thale cress | nucleus | 41.31 | 37.56 |
| CDY31648 | Canola | nucleus | 43.59 | 36.0 |
| CDX84278 | Canola | nucleus | 43.59 | 34.93 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 42.17 | 34.42 |
| Bra034451.1-P | Field mustard | cytosol | 39.32 | 26.14 |
| TraesCS3A01G234100.1 | Wheat | cytosol, nucleus, plastid | 13.96 | 22.79 |
| TraesCS3A01G234600.1 | Wheat | cytosol, nucleus, plastid | 13.96 | 22.79 |
| TraesCS3A01G234000.1 | Wheat | cytosol | 13.96 | 22.27 |
| TraesCS3A01G234500.1 | Wheat | cytosol | 13.68 | 21.82 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 23.08 | 15.88 |
| TraesCS2A01G466700.3 | Wheat | cytosol, mitochondrion, nucleus, plastid | 19.66 | 14.78 |
| TraesCS3A01G087800.1 | Wheat | plastid | 18.8 | 10.82 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 19.94 | 9.82 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 19.66 | 9.77 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 15.1 | 9.65 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 18.8 | 8.8 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:GTE1/GTE6 | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 | SMART:SM00297 | SUPFAM:SSF47370 | EnsemblPlantsGene:TraesCS4A01G377900 |
| EnsemblPlants:TraesCS4A01G377900.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:655251401..655254942
Molecular Weight (calculated)
39750.9 Da
IEP (calculated)
5.893
GRAVY (calculated)
-0.749
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPEDGAQQG AAATVEHPVV SEVDSFRRQV DDLASKTDVL ERRVNEVVGF YDVKKHGSGG RRASGSSRYA ANGARDSNCK GMPDLMRQLT GIIRQITSHE
101: WSAPFLQPVD VVGLQLDDYH KIITKPMDFS TIQNKMEGKD GTKYKSVREI HSDVRLIFTN AMTYNDEHHD VHIMAKLLLE KFEEKWLQLL PKVENEERKQ
201: QVEPNDAPTT DTSPEDAIAK LAKDTDDELN EINKQLEELR NMVVQRCRKM TTDEKRKLGA GLCHLTPEDL SKALELVAQD NPDFQTTAEE VDLDMDAQSE
301: TTLWRLKFFV REALERQASA AAAPGKTDEN AKRKRDIYNA LAKTASKRIR R
101: WSAPFLQPVD VVGLQLDDYH KIITKPMDFS TIQNKMEGKD GTKYKSVREI HSDVRLIFTN AMTYNDEHHD VHIMAKLLLE KFEEKWLQLL PKVENEERKQ
201: QVEPNDAPTT DTSPEDAIAK LAKDTDDELN EINKQLEELR NMVVQRCRKM TTDEKRKLGA GLCHLTPEDL SKALELVAQD NPDFQTTAEE VDLDMDAQSE
301: TTLWRLKFFV REALERQASA AAAPGKTDEN AKRKRDIYNA LAKTASKRIR R
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.