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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31648 Canola nucleus 100.0 90.59
AT2G34900.1 Thale cress nucleus 83.9 83.68
Bra034451.1-P Field mustard cytosol 82.6 60.23
Solyc09g090370.2.1 Tomato nucleus 45.97 51.16
KRH45305 Soybean nucleus 48.05 50.41
Os06t0138000-01 Rice cytosol, nucleus 15.84 49.19
PGSC0003DMT400044321 Potato nucleus 47.53 48.54
KRH37141 Soybean cytosol, nucleus 32.73 46.15
TraesCS1B01G385900.1 Wheat cytosol 39.74 44.74
TraesCS7A01G080900.1 Wheat nucleus 40.0 43.87
TraesCS1A01G367300.1 Wheat cytosol 39.74 43.84
EER87804 Sorghum nucleus 39.22 43.64
TraesCS4A01G377900.2 Wheat cytosol 39.74 43.59
TraesCS7D01G074500.1 Wheat cytosol 39.48 43.3
HORVU5Hr1G097840.6 Barley cytosol 39.22 43.14
TraesCS1D01G373000.1 Wheat cytosol 40.0 42.9
KRH12139 Soybean nucleus 38.7 42.69
HORVU7Hr1G018300.6 Barley cytosol 38.96 42.61
GSMUA_Achr8P29340_001 Banana nucleus 42.08 41.43
Zm00001d036092_P004 Maize endoplasmic reticulum, nucleus, plastid 38.7 40.82
Bra012810.1-P Field mustard cytosol 37.4 40.45
GSMUA_Achr8P34430_001 Banana nucleus 38.96 34.88
Bra031004.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 19.74 21.41
Bra008074.1-P Field mustard nucleus, plastid 20.0 19.64
Bra025948.1-P Field mustard mitochondrion 20.26 18.84
Bra038624.1-P Field mustard nucleus 11.69 18.59
Bra016586.1-P Field mustard nucleus, plastid 21.04 18.41
Bra005311.1-P Field mustard cytosol, plastid 10.13 16.74
Bra006068.1-P Field mustard nucleus 19.48 13.66
Bra022044.1-P Field mustard nucleus 18.44 13.52
Bra024402.1-P Field mustard nucleus, plastid 18.44 13.03
Bra025262.1-P Field mustard nucleus 17.66 12.57
Bra032431.1-P Field mustard nucleus 21.04 12.33
Bra039088.1-P Field mustard nucleus 18.96 11.21
Bra030643.1-P Field mustard nucleus 20.52 10.69
Bra015485.1-P Field mustard nucleus 20.78 10.68
Bra035848.1-P Field mustard nucleus 17.66 5.71
Protein Annotations
Gene3D:1.20.1270.220Gene3D:1.20.920.10MapMan:15.5.54EnsemblPlantsGene:Bra005383EnsemblPlants:Bra005383.1EnsemblPlants:Bra005383.1-P
InterPro:BromodomainInterPro:Bromodomain-like_sfInterPro:Bromodomain_CSncoils:CoilGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:GTE1/GTE6
InterPro:IPR001487InterPro:IPR027353InterPro:IPR036427InterPro:IPR038336UniProt:M4CME5InterPro:NET_dom
InterPro:NET_sfPFAM:PF00439PFAM:PF17035PRINTS:PR00503ScanProsite:PS00633PFscan:PS50014
PFscan:PS51525PANTHER:PTHR22880PANTHER:PTHR22880:SF163SMART:SM00297SUPFAM:SSF47370UniParc:UPI0002547F32
SEG:seg:::::
Description
AT2G34900 (E=2e-161) GTE01, IMB1, GTE1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding
Coordinates
chrA05:+:5128622..5130666
Molecular Weight (calculated)
43143.2 Da
IEP (calculated)
5.653
GRAVY (calculated)
-0.704
Length
385 amino acids
Sequence
(BLAST)
001: MSVNVKEEPV LVPNCDVVEN SELEVLNGDE ESKLEDYGTC VDVITERVNQ LEQKVVEVEH FYSTKDGAGQ TNTSKSNSGG KKVAISQPSK CSSAGKEKTR
101: GKHVSSPELM RQFATIIRQI AQQKWAWPFL EPVDVEGLGL DDYHKVIEKP MDLGTIRTKM EGSEYSNVRE IYADVRLVFK NAMRYNEEKH DVYVMAESLL
201: EKFEEKWLTI MPKLVEEEKK QAEEEAQDRA SKQLAVEAAQ AEKARDLSNE LYEIDQELEK LREIVVQKCR KLSTQEKKGL SAALGRLSPE DLSKALKMVS
301: EGNPHFPAGA PEVELDIDLQ SDVTLWRLKV FVQEALKAAN KSSGGGGTNA RNNNNGGEMN KTAAKRRREI TEAIKANKVK KAKKA
Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.