Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY31648 | Canola | nucleus | 100.0 | 90.59 |
AT2G34900.1 | Thale cress | nucleus | 83.9 | 83.68 |
Bra034451.1-P | Field mustard | cytosol | 82.6 | 60.23 |
Solyc09g090370.2.1 | Tomato | nucleus | 45.97 | 51.16 |
KRH45305 | Soybean | nucleus | 48.05 | 50.41 |
Os06t0138000-01 | Rice | cytosol, nucleus | 15.84 | 49.19 |
PGSC0003DMT400044321 | Potato | nucleus | 47.53 | 48.54 |
KRH37141 | Soybean | cytosol, nucleus | 32.73 | 46.15 |
TraesCS1B01G385900.1 | Wheat | cytosol | 39.74 | 44.74 |
TraesCS7A01G080900.1 | Wheat | nucleus | 40.0 | 43.87 |
TraesCS1A01G367300.1 | Wheat | cytosol | 39.74 | 43.84 |
EER87804 | Sorghum | nucleus | 39.22 | 43.64 |
TraesCS4A01G377900.2 | Wheat | cytosol | 39.74 | 43.59 |
TraesCS7D01G074500.1 | Wheat | cytosol | 39.48 | 43.3 |
HORVU5Hr1G097840.6 | Barley | cytosol | 39.22 | 43.14 |
TraesCS1D01G373000.1 | Wheat | cytosol | 40.0 | 42.9 |
KRH12139 | Soybean | nucleus | 38.7 | 42.69 |
HORVU7Hr1G018300.6 | Barley | cytosol | 38.96 | 42.61 |
GSMUA_Achr8P29340_001 | Banana | nucleus | 42.08 | 41.43 |
Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 38.7 | 40.82 |
Bra012810.1-P | Field mustard | cytosol | 37.4 | 40.45 |
GSMUA_Achr8P34430_001 | Banana | nucleus | 38.96 | 34.88 |
Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 19.74 | 21.41 |
Bra008074.1-P | Field mustard | nucleus, plastid | 20.0 | 19.64 |
Bra025948.1-P | Field mustard | mitochondrion | 20.26 | 18.84 |
Bra038624.1-P | Field mustard | nucleus | 11.69 | 18.59 |
Bra016586.1-P | Field mustard | nucleus, plastid | 21.04 | 18.41 |
Bra005311.1-P | Field mustard | cytosol, plastid | 10.13 | 16.74 |
Bra006068.1-P | Field mustard | nucleus | 19.48 | 13.66 |
Bra022044.1-P | Field mustard | nucleus | 18.44 | 13.52 |
Bra024402.1-P | Field mustard | nucleus, plastid | 18.44 | 13.03 |
Bra025262.1-P | Field mustard | nucleus | 17.66 | 12.57 |
Bra032431.1-P | Field mustard | nucleus | 21.04 | 12.33 |
Bra039088.1-P | Field mustard | nucleus | 18.96 | 11.21 |
Bra030643.1-P | Field mustard | nucleus | 20.52 | 10.69 |
Bra015485.1-P | Field mustard | nucleus | 20.78 | 10.68 |
Bra035848.1-P | Field mustard | nucleus | 17.66 | 5.71 |
Protein Annotations
Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | EnsemblPlantsGene:Bra005383 | EnsemblPlants:Bra005383.1 | EnsemblPlants:Bra005383.1-P |
InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GTE1/GTE6 |
InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | UniProt:M4CME5 | InterPro:NET_dom |
InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 |
PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF163 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0002547F32 |
SEG:seg | : | : | : | : | : |
Description
AT2G34900 (E=2e-161) GTE01, IMB1, GTE1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding
Coordinates
chrA05:+:5128622..5130666
Molecular Weight (calculated)
43143.2 Da
IEP (calculated)
5.653
GRAVY (calculated)
-0.704
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVNVKEEPV LVPNCDVVEN SELEVLNGDE ESKLEDYGTC VDVITERVNQ LEQKVVEVEH FYSTKDGAGQ TNTSKSNSGG KKVAISQPSK CSSAGKEKTR
101: GKHVSSPELM RQFATIIRQI AQQKWAWPFL EPVDVEGLGL DDYHKVIEKP MDLGTIRTKM EGSEYSNVRE IYADVRLVFK NAMRYNEEKH DVYVMAESLL
201: EKFEEKWLTI MPKLVEEEKK QAEEEAQDRA SKQLAVEAAQ AEKARDLSNE LYEIDQELEK LREIVVQKCR KLSTQEKKGL SAALGRLSPE DLSKALKMVS
301: EGNPHFPAGA PEVELDIDLQ SDVTLWRLKV FVQEALKAAN KSSGGGGTNA RNNNNGGEMN KTAAKRRREI TEAIKANKVK KAKKA
101: GKHVSSPELM RQFATIIRQI AQQKWAWPFL EPVDVEGLGL DDYHKVIEKP MDLGTIRTKM EGSEYSNVRE IYADVRLVFK NAMRYNEEKH DVYVMAESLL
201: EKFEEKWLTI MPKLVEEEKK QAEEEAQDRA SKQLAVEAAQ AEKARDLSNE LYEIDQELEK LREIVVQKCR KLSTQEKKGL SAALGRLSPE DLSKALKMVS
301: EGNPHFPAGA PEVELDIDLQ SDVTLWRLKV FVQEALKAAN KSSGGGGTNA RNNNNGGEMN KTAAKRRREI TEAIKANKVK KAKKA
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.