Factsheet for Bra034451.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005383.1-P	Field mustard	nucleus	60.23	82.6
CDX84278	Canola	nucleus	62.31	75.11
AT2G34900.1	Thale cress	nucleus	52.27	71.5
KRH37141	Soybean	cytosol, nucleus	23.86	46.15
Solyc09g090370.2.1	Tomato	nucleus	29.73	45.38
KRH45305	Soybean	nucleus	31.44	45.23
PGSC0003DMT400044321	Potato	nucleus	31.44	44.03
TraesCS1A01G367300.1	Wheat	cytosol	26.89	40.69
TraesCS1B01G385900.1	Wheat	cytosol	26.33	40.64
TraesCS7A01G080900.1	Wheat	nucleus	26.33	39.6
TraesCS1D01G373000.1	Wheat	cytosol	26.89	39.55
GSMUA_Achr8P34430_001	Banana	nucleus	32.2	39.53
TraesCS4A01G377900.2	Wheat	cytosol	26.14	39.32
HORVU5Hr1G097840.6	Barley	cytosol	25.95	39.14
TraesCS7D01G074500.1	Wheat	cytosol	25.95	39.03
EER87804	Sorghum	nucleus	25.57	39.02
HORVU7Hr1G018300.6	Barley	cytosol	25.76	38.64
KRH12139	Soybean	nucleus	25.38	38.4
GSMUA_Achr8P29340_001	Banana	nucleus	28.22	38.11
Os06t0138000-01	Rice	cytosol, nucleus	8.71	37.1
Bra012810.1-P	Field mustard	cytosol	25.0	37.08
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	25.38	36.71
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	13.26	19.72
Bra008074.1-P	Field mustard	nucleus, plastid	13.64	18.37
Bra005311.1-P	Field mustard	cytosol, plastid	7.77	17.6
Bra016586.1-P	Field mustard	nucleus, plastid	14.2	17.05
Bra025948.1-P	Field mustard	mitochondrion	13.26	16.91
Bra038624.1-P	Field mustard	nucleus	7.2	15.7
Bra006068.1-P	Field mustard	nucleus	13.83	13.3
Bra024402.1-P	Field mustard	nucleus, plastid	13.07	12.66
Bra032431.1-P	Field mustard	nucleus	14.77	11.87
Bra022044.1-P	Field mustard	nucleus	10.98	11.05
Bra025262.1-P	Field mustard	nucleus	11.17	10.91
Bra039088.1-P	Field mustard	nucleus	13.07	10.6
Bra030643.1-P	Field mustard	nucleus	14.39	10.28
Bra015485.1-P	Field mustard	nucleus	14.58	10.28
Bra035848.1-P	Field mustard	nucleus	11.17	4.95

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EnsemblPlantsGene:Bra034451	EnsemblPlants:Bra034451.1	EnsemblPlants:Bra034451.1-P
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:Bromodomain_CS	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GTE1/GTE6
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M4F058	InterPro:NET_dom
InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	ScanProsite:PS00633	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF163	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002548051
SEG:seg	:	:	:	:	:

Description

AT2G34900 (E=3e-143) GTE01, IMB1, GTE1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding

Coordinates

chrA05:+:14137327..14140460

Molecular Weight (calculated)

59702.2 Da

IEP (calculated)

5.447

GRAVY (calculated)

-0.496

Length

528 amino acids

Sequence
(BLAST)

001: MILPREIIDR PWKGGIASLL IKEEPPDGQC ITKPCIYQVA GPPTHEINHT SYIGASSDIG ALKEGYLCNH KEFNRETSFY RFSTQPEHAA NWFHTKKSNG
101: LGDMPVTSQT IYTASELVLI KESNSLLKEC ATQTHVWKPG DYSLHLRAVG EFLPCTSSHM IKMNPLFVNL PYMDAFTLGE EPVLVPNCDV VENSELEVLN
201: GDEESKLEDY GTCVDVITER VNQLEQKVVE VEHFYSTKDG AGQTNTSKSN SGGKKVAISQ PSKCSSAGKE KTRGKHVSSP ELMRQFATII RQIAQQKWAW
301: PFLEPVDVEG LGLDDYHKVI EKPMDLGTIR TKMEGSEYSN VREIYADVRL VFKNAMRYNE EKHDVYVMAE SLLEKFEEKW LTIMPKLVEE EKKQAEEEAQ
401: DRASKQLAVE AAQAEKARDL SNELYEIDQE LEKLREIVVQ KCRKLSTQEK KGLSAALGRL SPEDLSKALK MVSEGNPHFP AGAPEVELDI DLQEVSSFVE
501: LKRWGLKRWS IVRCPHVPQN LPRIIISF

Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)

001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA

Arabidopsis Description

GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.