Factsheet for Bra022044.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43984	Canola	endoplasmic reticulum	75.05	90.16
AT5G46550.1	Thale cress	cytosol	56.0	59.51
KRH11112	Soybean	nucleus	31.24	29.03
KRH21136	Soybean	nucleus	31.05	28.8
EER97261	Sorghum	nucleus	26.29	28.34
VIT_10s0003g02240.t01	Wine grape	nucleus	30.29	27.75
Solyc02g071510.2.1	Tomato	nucleus	30.1	26.92
TraesCS7B01G461100.3	Wheat	nucleus, plastid	27.62	26.51
TraesCS7D01G526000.1	Wheat	nucleus, plastid	27.24	26.48
Bra025262.1-P	Field mustard	nucleus	27.24	26.43
TraesCS7A01G539800.2	Wheat	nucleus, plastid	27.62	26.41
PGSC0003DMT400018643	Potato	nucleus	30.29	26.24
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	10.67	24.56
EES09393	Sorghum	nucleus	27.43	23.8
GSMUA_Achr4P27780_001	Banana	nucleus	30.48	23.74
Os07t0507700-01	Rice	nucleus	26.86	23.46
Zm00001d004790_P008	Maize	nucleus	25.52	23.18
Bra038624.1-P	Field mustard	nucleus	10.48	22.73
Zm00001d053022_P001	Maize	nucleus	25.52	21.86
Bra039088.1-P	Field mustard	nucleus	27.05	21.81
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	13.52	20.0
HORVU7Hr1G118300.1	Barley	cytosol	26.29	19.38
Bra008074.1-P	Field mustard	nucleus, plastid	14.29	19.13
Bra025948.1-P	Field mustard	mitochondrion	14.67	18.6
Bra005383.1-P	Field mustard	nucleus	13.52	18.44
Bra016586.1-P	Field mustard	nucleus, plastid	15.24	18.18
Bra024402.1-P	Field mustard	nucleus, plastid	17.52	16.88
Bra012810.1-P	Field mustard	cytosol	11.43	16.85
Bra005311.1-P	Field mustard	cytosol, plastid	7.24	16.31
Bra006068.1-P	Field mustard	nucleus	16.38	15.66
EES09391	Sorghum	cytosol, mitochondrion, nucleus	12.95	15.63
Bra032431.1-P	Field mustard	nucleus	17.33	13.85
Bra030643.1-P	Field mustard	nucleus	17.33	12.31
Bra015485.1-P	Field mustard	nucleus	17.33	12.15
Bra035848.1-P	Field mustard	nucleus	27.43	12.09
Bra034451.1-P	Field mustard	cytosol	11.05	10.98

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.5.54	EnsemblPlantsGene:Bra022044	EnsemblPlants:Bra022044.1	EnsemblPlants:Bra022044.1-P	InterPro:Bromodomain
InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo
InterPro:IPR001487	InterPro:IPR036427	UniProt:M4DZU7	PFAM:PF00439	PRINTS:PR00503	PFscan:PS50014
PANTHER:PTHR22880	PANTHER:PTHR22880:SF153	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002545F39	SEG:seg

Description

AT5G46550 (E=6e-068) | DNA-binding bromodomain-containing protein

Coordinates

chrA02:-:18825151..18827430

Molecular Weight (calculated)

58872.0 Da

IEP (calculated)

7.307

GRAVY (calculated)

-0.683

Length

525 amino acids

Sequence
(BLAST)

001: MVGITKLRIK FGPEGSVKAF QTFNNCTNAK STENKPIGKE EEEDVQSRKR GPEELEEVQA HKKQKLNRVL SSQCLNLLKS LRGHEFGWLF GEPVDPVKLN
101: IPDYFSVISK PMDLGTISSK LLKNVYSSAD EFAADVRLTF DNALRYNPPE NFVHDVAKEL LEIFEARWES LRKKKVSDLH GEKVTEGSRR QPVEVGWVRQ
201: SSPETSASSG RFSAELPKRA KEMSQKVPPL LKSVTKLSKK DTPVVTQTTL ATKLRIKKFE QGLGSTVENP SKGSTPTSSC RCSSCGRITC ICLKSCNSSG
301: SEVSTLTDNL VKDNSCSQAS ESDPHSNGSI SSKNDCVSSQ LDTPLDNGKL SFLSYELKKP LPPMPPLPPE KAIRAAILKC QFAETILKAK HRKVLDKSNK
401: SDLIRIQIEK EQMEKTQREE KARIEAEIAA AKLATRMRAE AELKEKRERE RLKLEKMVKE VDLEENNASK FNENMINLCG SCDPTRTWLP ELGLFLRNDD
501: DDSDEDDSEV FDAMRIDDLE EGEIL

Best Arabidopsis Sequence Match ( AT5G46550.1 )
(BLAST)

001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL

Arabidopsis Description

GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.