Factsheet for TraesCS7B01G461100.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G539800.2	Wheat	nucleus, plastid	97.81	97.45
TraesCS7D01G526000.1	Wheat	nucleus, plastid	94.33	95.56
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	32.54	78.07
HORVU7Hr1G118300.1	Barley	cytosol	91.59	70.37
EER97261	Sorghum	nucleus	58.32	65.5
Zm00001d004790_P008	Maize	nucleus	63.25	59.86
Os07t0507700-01	Rice	nucleus	64.35	58.57
Zm00001d053022_P001	Maize	nucleus	62.16	55.46
KRH11112	Soybean	nucleus	28.88	27.96
Bra022044.1-P	Field mustard	nucleus	26.51	27.62
KRH21136	Soybean	nucleus	28.34	27.39
AT5G46550.1	Thale cress	cytosol	24.68	27.33
CDY43984	Canola	endoplasmic reticulum	21.75	27.23
VIT_10s0003g02240.t01	Wine grape	nucleus	28.52	27.23
Solyc02g071510.2.1	Tomato	nucleus	29.07	27.09
PGSC0003DMT400018643	Potato	nucleus	29.43	26.57
GSMUA_Achr4P27780_001	Banana	nucleus	30.35	24.63
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	9.32	23.72
TraesCS6B01G244000.2	Wheat	plastid	29.62	22.5
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	8.96	22.27
TraesCS3B01G103200.2	Wheat	nucleus	28.7	21.96
TraesCS5B01G052900.1	Wheat	plastid	9.51	21.85
TraesCS3B01G141400.2	Wheat	nucleus, plastid	27.61	21.18
TraesCS7B01G212400.2	Wheat	nucleus	27.61	20.13
TraesCS3B01G164100.1	Wheat	nucleus, plastid	16.09	17.25
TraesCS1B01G385900.1	Wheat	cytosol	10.24	16.37
TraesCS2B01G489500.1	Wheat	plastid	12.07	14.25

Protein Annotations

EnsemblPlants:TraesCS7B01G461100.3	EnsemblPlantsGene:TraesCS7B01G461100	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	ncoils:Coil	PANTHER:PTHR22880
PANTHER:PTHR22880:SF230	PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	SEG:seg	SMART:SM00297
SUPFAM:SSF47370	MapMan:15.5.54	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:718466919..718471352

Molecular Weight (calculated)

60205.3 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.654

Length

547 amino acids

Sequence
(BLAST)

001: MKPEVTGHLP KSESNKPNTM TTQACKRRRS VYISSGSEDS GTDSEVEGSK RSQKSGTTSI SSSEHRPSSN NKAGSMNASK TRVCRNILGK LMDHPGGWLF
101: HKPVDPDLFG IPDYFDVIRN PMDLGTVKKK LTNKNYLSTD EFAADVRLTF SNAMTYNPPG NQVHTVAEQL NIMFNSEWTS YERKWIDRNL KPVQLPMKVI
201: KAHVAVNSKP VVSRGLVACS DSSAKKTLTN AISSKVKIKF CVRGSGQTLS KETPVQAAGS KEGPLHHPVA CTKVSTIHHS IPCTKESANT TKVQSSEHRV
301: QSIGNESRSC SDTSTSPLSS YGQGDGSYLQ AEPLSPAKAL RAAMLKRRFA GTIVKAQQKA LLDHGQQIDP AKLQLEKERL EKRQQEEKER IEAQVKAAEA
401: AAQFKLDEEL RKKREREREA ARLALHMMKK TVDIDNSDFL KDLENISKKW ELNPPAKLIV DFVDGMELPP GLGSPLERLG LFMKRDMEEE VEDEMEDSPT
501: SVDVDSVSPP SVDADSVSPP SVDVNSMLPP AVDMEIDGEE GEIGCCG

Best Arabidopsis Sequence Match ( AT5G46550.1 )
(BLAST)

001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL

Arabidopsis Description

GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.