Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 71.35 | 94.07 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 70.93 | 91.99 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 70.37 | 91.59 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 28.93 | 90.35 |
| EER97261 | Sorghum | nucleus | 44.8 | 65.5 |
| Os07t0507700-01 | Rice | nucleus | 51.54 | 61.06 |
| Zm00001d004790_P008 | Maize | nucleus | 47.75 | 58.82 |
| Zm00001d053022_P001 | Maize | nucleus | 46.91 | 54.49 |
| KRH11112 | Soybean | nucleus | 22.33 | 28.14 |
| KRH21136 | Soybean | nucleus | 21.91 | 27.56 |
| VIT_10s0003g02240.t01 | Wine grape | nucleus | 21.49 | 26.7 |
| Solyc02g071510.2.1 | Tomato | nucleus | 21.91 | 26.58 |
| AT5G46550.1 | Thale cress | cytosol | 18.26 | 26.32 |
| Bra022044.1-P | Field mustard | nucleus | 19.38 | 26.29 |
| PGSC0003DMT400018643 | Potato | nucleus | 22.33 | 26.24 |
| CDY43984 | Canola | endoplasmic reticulum | 15.73 | 25.63 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 23.17 | 24.48 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 23.03 | 22.94 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 22.05 | 22.05 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 21.77 | 19.9 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 12.36 | 15.94 |
| HORVU5Hr1G097840.6 | Barley | cytosol | 7.58 | 15.43 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 7.58 | 15.34 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 12.36 | 13.9 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 12.36 | 13.84 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G118300.1 | EnsemblPlantsGene:HORVU7Hr1G118300 | Gene3D:1.20.920.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:IPR001487 | InterPro:IPR036427 | ncoils:Coil | PANTHER:PTHR22880 |
| PANTHER:PTHR22880:SF230 | PFAM:PF00439 | PFscan:PS50014 | PRINTS:PR00503 | SEG:seg | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI000B46D076 | UniProt:A0A287XYX7 | MapMan:15.5.54 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:647183877..647190423
Molecular Weight (calculated)
71873.0 Da
IEP (calculated)
8.657
GRAVY (calculated)
-0.615
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSPPPLLCPR VRPATAPHAP RPRPNSPPSA GPILPPPSPA VLSRRRPPTP
101: CPDAEPARRR ARASARVQVS GPLSATPAEA SHSGAKDSEG PRPPPAPADT RSADWEGEVV LYVPCVSIRE GIMKPEITSH LSKSGSNKPN TMTTQACKRR
201: RSVYISSGSE DSGTDSEVEG NKRSQKSGTT SISSSENRPS SNNKAGSMNA SKTRVCRNIL GKLMDHPGGW LFHKPVDPDL FGIPDYFDVI RNPMDLGTVK
301: KKLTNKSYLS TDDFAADVRL TFSNAMTYNP PGNQVHTVAE QLNIMFNSEW TSYERKWIDR NLKPVQLPMK VIKAHVAVNS KPVVSRGLAA CPNSSAKNTL
401: TNAISSKVKI KFCVRGSGQT LSKDVNETSL QAAGSKEGSL NHSIPGTKES GNTTKVQSSE HRVQSIGNES RSCSDTSTSP LSSYGQGDGS YLHAEPLSPT
501: KALRAAMLKR RFAGTIVKAQ QKALLDHGQQ IDPAKLKLEK ERLEKRQQEE KERIEAQVKA AEAAAQYKLD EELRKKRERE REAARLALHM MKKTVDIDNS
601: DFLKDLENIS KKWELNPPAK LIVDFVDGME LPPGLGSPLE RLGLFMKRDV EEEVEDEMED SVSPPSVDVD SISPPSVDVG SISSPSVDVE SILPPSVDMH
701: IDGEEGEIGC CG
101: CPDAEPARRR ARASARVQVS GPLSATPAEA SHSGAKDSEG PRPPPAPADT RSADWEGEVV LYVPCVSIRE GIMKPEITSH LSKSGSNKPN TMTTQACKRR
201: RSVYISSGSE DSGTDSEVEG NKRSQKSGTT SISSSENRPS SNNKAGSMNA SKTRVCRNIL GKLMDHPGGW LFHKPVDPDL FGIPDYFDVI RNPMDLGTVK
301: KKLTNKSYLS TDDFAADVRL TFSNAMTYNP PGNQVHTVAE QLNIMFNSEW TSYERKWIDR NLKPVQLPMK VIKAHVAVNS KPVVSRGLAA CPNSSAKNTL
401: TNAISSKVKI KFCVRGSGQT LSKDVNETSL QAAGSKEGSL NHSIPGTKES GNTTKVQSSE HRVQSIGNES RSCSDTSTSP LSSYGQGDGS YLHAEPLSPT
501: KALRAAMLKR RFAGTIVKAQ QKALLDHGQQ IDPAKLKLEK ERLEKRQQEE KERIEAQVKA AEAAAQYKLD EELRKKRERE REAARLALHM MKKTVDIDNS
601: DFLKDLENIS KKWELNPPAK LIVDFVDGME LPPGLGSPLE RLGLFMKRDV EEEVEDEMED SVSPPSVDVD SISPPSVDVG SISSPSVDVE SILPPSVDMH
701: IDGEEGEIGC CG
001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
Arabidopsis Description
GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.