Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022044.1-P | Field mustard | nucleus | 59.51 | 56.0 |
| CDY43984 | Canola | endoplasmic reticulum | 46.96 | 53.09 |
| EER97261 | Sorghum | nucleus | 27.33 | 27.72 |
| VIT_10s0003g02240.t01 | Wine grape | nucleus | 31.78 | 27.4 |
| KRH11112 | Soybean | nucleus | 31.17 | 27.26 |
| KRH21136 | Soybean | nucleus | 30.97 | 27.03 |
| Solyc02g071510.2.1 | Tomato | nucleus | 29.96 | 25.21 |
| PGSC0003DMT400018643 | Potato | nucleus | 30.77 | 25.08 |
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 27.13 | 24.81 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 27.33 | 24.68 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 27.33 | 24.59 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 11.13 | 24.12 |
| Os07t0507700-01 | Rice | nucleus | 28.54 | 23.46 |
| Zm00001d004790_P008 | Maize | nucleus | 26.92 | 23.01 |
| EES09393 | Sorghum | nucleus | 27.73 | 22.64 |
| Zm00001d053022_P001 | Maize | nucleus | 27.13 | 21.86 |
| AT3G01770.1 | Thale cress | nucleus | 27.13 | 21.61 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 28.54 | 20.92 |
| AT5G14270.2 | Thale cress | nucleus | 29.15 | 20.9 |
| HORVU7Hr1G118300.1 | Barley | cytosol | 26.32 | 18.26 |
| EES09391 | Sorghum | cytosol, mitochondrion, nucleus | 14.37 | 16.32 |
| AT2G34900.1 | Thale cress | nucleus | 12.55 | 16.06 |
| AT3G27260.3 | Thale cress | nucleus | 26.32 | 15.82 |
| AT1G73150.1 | Thale cress | plastid | 13.97 | 14.97 |
| AT3G52280.2 | Thale cress | nucleus | 10.73 | 13.73 |
| AT5G63320.1 | Thale cress | nucleus | 27.94 | 13.01 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 12.75 | 12.94 |
| AT5G65630.1 | Thale cress | nucleus | 14.98 | 12.54 |
| AT5G10550.1 | Thale cress | nucleus | 14.57 | 12.39 |
| AT1G06230.2 | Thale cress | nucleus | 16.19 | 10.44 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.5.54 | EntrezGene:834698 | ProteinID:AED95397.1 | EMBL:AK118168 | ArrayExpress:AT5G46550 |
| EnsemblPlantsGene:AT5G46550 | RefSeq:AT5G46550 | TAIR:AT5G46550 | RefSeq:AT5G46550-TAIR-G | EnsemblPlants:AT5G46550.1 | TAIR:AT5G46550.1 |
| Unigene:At.29948 | ProteinID:BAA97526.1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR036427 | RefSeq:NP_199467.2 | PFAM:PF00439 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00503 | PFscan:PS50014 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF153 | UniProt:Q9LS28 |
| SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI00000ADEAE | SEG:seg | : | : |
Description
GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
Coordinates
chr5:-:18884218..18886960
Molecular Weight (calculated)
55622.2 Da
IEP (calculated)
9.816
GRAVY (calculated)
-0.612
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.