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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G01770.1 Thale cress nucleus 63.86 70.97
VIT_14s0171g00380.t01 Wine grape nucleus 52.69 49.25
KRH07021 Soybean nucleus 50.36 46.64
KRG94435 Soybean nucleus 50.22 46.63
PGSC0003DMT400052108 Potato nucleus 46.88 44.31
KRH07022 Soybean nucleus 49.93 43.77
Solyc02g093880.2.1 Tomato nucleus 45.86 43.59
GSMUA_Achr8P01140_001 Banana nucleus 46.44 42.61
AT3G27260.3 Thale cress nucleus 49.2 41.24
GSMUA_Achr2P20970_001 Banana nucleus 42.09 40.28
GSMUA_Achr8P08920_001 Banana nucleus 37.88 40.15
GSMUA_Achr10P... Banana nucleus 36.57 39.5
TraesCS3A01G087800.1 Wheat plastid 33.24 37.54
TraesCS3A01G122200.1 Wheat nucleus 37.59 36.33
TraesCS3D01G124100.1 Wheat nucleus 37.59 36.33
TraesCS7D01G309100.1 Wheat nucleus 39.48 36.27
GSMUA_Achr3P02660_001 Banana plasma membrane 34.4 36.24
TraesCS7A01G312700.2 Wheat nucleus 39.19 36.0
Os02t0601800-03 Rice nucleus 37.3 35.99
TraesCS6D01G196600.3 Wheat nucleus 36.72 35.99
TraesCS3B01G141400.2 Wheat nucleus, plastid 37.16 35.9
KXG24325 Sorghum nucleus 36.87 35.88
Zm00001d035167_P001 Maize nucleus 39.19 35.62
TraesCS3D01G087900.4 Wheat nucleus 37.01 35.61
TraesCS7B01G212400.2 Wheat nucleus 38.75 35.6
TraesCS6A01G214000.1 Wheat nucleus 36.43 35.55
TraesCS3B01G103200.2 Wheat nucleus 36.87 35.52
HORVU3Hr1G022660.1 Barley nucleus 36.57 35.39
TraesCS6B01G244000.2 Wheat plastid 36.57 35.0
HORVU6Hr1G054560.16 Barley nucleus 36.28 34.97
HORVU7Hr1G074620.7 Barley cytosol, mitochondrion, nucleus 39.19 34.66
EES07108 Sorghum nucleus 35.41 34.32
Zm00001d017126_P001 Maize nucleus 34.54 34.2
Zm00001d049638_P009 Maize nucleus 37.01 32.82
HORVU3Hr1G015760.1 Barley nucleus 24.82 30.98
GSMUA_Achr3P02670_001 Banana nucleus 31.49 30.78
AT5G46550.1 Thale cress cytosol 20.9 29.15
AT5G63320.1 Thale cress nucleus 42.38 27.52
AT1G73150.1 Thale cress plastid 16.4 24.51
AT5G10550.1 Thale cress nucleus 19.01 22.55
AT2G34900.1 Thale cress nucleus 12.48 22.28
AT5G65630.1 Thale cress nucleus 19.01 22.2
AT1G17790.1 Thale cress nucleus, plastid 14.95 21.15
AT3G52280.2 Thale cress nucleus 10.16 18.13
AT1G06230.2 Thale cress nucleus 15.97 14.36
Protein Annotations
Gene3D:1.20.920.10MapMan:15.5.54EntrezGene:831277ProteinID:AED92011.1ArrayExpress:AT5G14270EnsemblPlantsGene:AT5G14270
RefSeq:AT5G14270TAIR:AT5G14270RefSeq:AT5G14270-TAIR-GEnsemblPlants:AT5G14270.2TAIR:AT5G14270.2Symbol:ATBET9
Unigene:At.5165Symbol:BET9InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilUniProt:F4K6Q7
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:GTE_bromoInterPro:IPR001487InterPro:IPR027353
InterPro:IPR036427InterPro:NET_domRefSeq:NP_001190308.1PFAM:PF00439PFAM:PF17035PO:PO:0000005
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PRINTS:PR00503PFscan:PS50014PFscan:PS51525PANTHER:PTHR22880PANTHER:PTHR22880:SF227
SMART:SM00297SUPFAM:SSF47370UniParc:UPI0001E930D7SEG:seg::
Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
Coordinates
chr5:+:4604613..4608822
Molecular Weight (calculated)
75996.3 Da
IEP (calculated)
4.614
GRAVY (calculated)
-0.617
Length
689 amino acids
Sequence
(BLAST)
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGLASVG GLDQLESASP EKISSVEADC QQDGNSAQNE
501: KQLPPEKSYR AAILKNRFAD IILKAREKPL NQNDTRDPEK LQREREELEL QKKKEKARLQ AEAKAAEEAR RKAEAQAAAE AAAEAKRKLE LEREAARQAL
601: MEMEQSVELN ENAKFLEDLE LLKTVDTDHL TNTIEEEDGP DVGLRSFSFG GSNPLEQLGL FMKQDEDEEE ADPLTSPAPE IDIEEGEID
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.