Factsheet for AT3G01770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G14270.2	Thale cress	nucleus	70.97	63.86
VIT_14s0171g00380.t01	Wine grape	nucleus	53.55	45.05
KRH07021	Soybean	nucleus	50.32	41.94
KRG94435	Soybean	nucleus	49.68	41.51
PGSC0003DMT400052108	Potato	nucleus	47.1	40.05
Solyc02g093880.2.1	Tomato	nucleus	45.81	39.17
KRH07022	Soybean	nucleus	48.71	38.42
GSMUA_Achr2P20970_001	Banana	nucleus	44.35	38.19
AT3G27260.3	Thale cress	nucleus	50.48	38.08
GSMUA_Achr8P01140_001	Banana	nucleus	45.32	37.42
GSMUA_Achr10P...	Banana	nucleus	37.74	36.68
GSMUA_Achr8P08920_001	Banana	nucleus	37.26	35.54
GSMUA_Achr3P02660_001	Banana	plasma membrane	37.42	35.47
TraesCS3A01G087800.1	Wheat	plastid	33.87	34.43
Os02t0601800-03	Rice	nucleus	38.23	33.19
TraesCS6D01G196600.3	Wheat	nucleus	37.58	33.14
TraesCS6A01G214000.1	Wheat	nucleus	37.42	32.86
TraesCS3D01G124100.1	Wheat	nucleus	37.58	32.68
TraesCS3B01G141400.2	Wheat	nucleus, plastid	37.42	32.54
TraesCS3A01G122200.1	Wheat	nucleus	37.42	32.54
TraesCS7D01G309100.1	Wheat	nucleus	39.35	32.53
EES07108	Sorghum	nucleus	37.26	32.49
TraesCS7A01G312700.2	Wheat	nucleus	39.19	32.4
TraesCS6B01G244000.2	Wheat	plastid	37.58	32.36
Zm00001d017126_P001	Maize	nucleus	36.29	32.33
TraesCS7B01G212400.2	Wheat	nucleus	39.03	32.27
HORVU6Hr1G054560.16	Barley	nucleus	37.1	32.17
TraesCS3D01G087900.4	Wheat	nucleus	37.1	32.12
KXG24325	Sorghum	nucleus	36.61	32.06
Zm00001d035167_P001	Maize	nucleus	39.03	31.93
HORVU3Hr1G022660.1	Barley	nucleus	36.61	31.88
TraesCS3B01G103200.2	Wheat	nucleus	36.61	31.75
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	39.52	31.45
GSMUA_Achr3P02670_001	Banana	nucleus	33.39	29.36
Zm00001d049638_P009	Maize	nucleus	36.45	29.09
HORVU3Hr1G015760.1	Barley	nucleus	24.52	27.54
AT5G46550.1	Thale cress	cytosol	21.61	27.13
AT5G63320.1	Thale cress	nucleus	42.9	25.07
AT1G73150.1	Thale cress	plastid	15.81	21.26
AT1G17790.1	Thale cress	nucleus, plastid	16.13	20.53
AT2G34900.1	Thale cress	nucleus	12.26	19.69
AT5G10550.1	Thale cress	nucleus	17.74	18.93
AT5G65630.1	Thale cress	nucleus	17.58	18.47
AT3G52280.2	Thale cress	nucleus	9.84	15.8
AT1G06230.2	Thale cress	nucleus	16.29	13.19

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:821083	ProteinID:AAF01563.1	ProteinID:AAF03453.1
ProteinID:AEE73712.1	ArrayExpress:AT3G01770	EnsemblPlantsGene:AT3G01770	RefSeq:AT3G01770	TAIR:AT3G01770	RefSeq:AT3G01770-TAIR-G
EnsemblPlants:AT3G01770.1	TAIR:AT3G01770.1	Symbol:ATBET10	EMBL:AY057662	EMBL:AY099729	EMBL:AY128906
Unigene:At.18478	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045893	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336
InterPro:NET_dom	InterPro:NET_sf	RefSeq:NP_566151.1	PFAM:PF00439	PFAM:PF17035	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF227	UniProt:Q93ZB7	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI00000A3E3B	SEG:seg

Description

GTE11Transcription factor GTE11 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZB7]

Coordinates

chr3:-:275333..278841

Molecular Weight (calculated)

69885.2 Da

IEP (calculated)

5.106

GRAVY (calculated)

-0.780

Length

620 amino acids

Sequence
(BLAST)

001: MTVRNGGFPG DYNRNSFDSP GGCDDSPNAS KDDETFGVPR IVLPLSDLSS SERRKWIHTL RQELEQLRSF QKSVGDLLPI SKIVTSTPAS NVSRPKSFGM
101: SRCSTGPGKR VLPFTATKPE PVTTSTMLRM KQCESLLKRL MSQQHCWLFN TPVDVVKLNI PDYFTIIKHP MDLGTVKSKL TSGTYSSPSE FSADVRLTFR
201: NAMTYNPSDN NVYRFADTLS KFFEVRWKTI EKKSSGTKSE PSNLATLAHK DIAIPEPVAK KRKMNAVKRN SLLEPAKRVM TDEDRVKLGR DLGSLTEFPV
301: QIINFLRDHS SKEERSGDDE IEIDINDLSH DALFQLRDLF DEFLRENQKK DSNGEPCVLE LLHGSGPGNS LTQHCDGSEL EDEDVDIGNY EHPISHISTV
401: RTEKDSVGGL NQMEDASRGK LSLIEGADGH QDGNSAPKEK ELPPEKRYRA ALLKNRFADI ILKAQEITLN QNEKRDPETL QREKEELELQ KKKEKARLQA
501: EAKEAEEARR KAEAQEAKRK LELEREAARQ ALLEMEKSVE INENTRFLKD LELLKTVNTD QLRNLRDVGS ESDGLAVFGF GGSNPLEQLG LFMKHEEDED
601: ESDMLAFPDP GNEVEEGEID

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.