Factsheet for AT1G73150.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48040	Canola	nucleus, plastid	63.99	75.26
Bra008074.1-P	Field mustard	nucleus, plastid	63.77	75.0
CDX82103	Canola	plastid	47.94	70.61
CDX82101	Canola	nucleus	27.55	69.4
AT1G17790.1	Thale cress	nucleus, plastid	68.55	64.89
GSMUA_Achr11P...	Banana	nucleus	37.53	40.9
GSMUA_Achr10P...	Banana	nucleus, plastid	38.18	39.37
TraesCS3D01G146600.1	Wheat	nucleus, plastid	41.43	37.75
GSMUA_Achr7P09350_001	Banana	nucleus, plastid	41.87	37.55
TraesCS3B01G164100.1	Wheat	nucleus, plastid	41.43	37.45
Zm00001d008922_P001	Maize	plastid	39.7	37.35
TraesCS3A01G140500.1	Wheat	nucleus, plastid	41.21	37.25
EES02258	Sorghum	plastid	34.92	36.1
Os01t0214300-01	Rice	cytosol, nucleus	12.58	34.94
PGSC0003DMT400061991	Potato	cytoskeleton, cytosol, nucleus	23.21	34.41
VIT_19s0014g01650.t01	Wine grape	nucleus	44.25	34.17
GSMUA_Achr1P11660_001	Banana	nucleus	37.53	33.72
Os02t0250300-01	Rice	nucleus	38.39	26.98
TraesCS6D01G177700.1	Wheat	cytosol, plastid	36.88	26.77
HORVU6Hr1G045030.1	Barley	nucleus	36.66	26.7
Zm00001d016131_P006	Maize	nucleus	38.83	26.68
HORVU6Hr1G045070.4	Barley	nucleus	36.66	26.57
Solyc12g014170.1.1	Tomato	nucleus	39.7	26.11
AT5G10550.1	Thale cress	nucleus	32.75	25.99
PGSC0003DMT400039787	Potato	nucleus	39.26	25.71
OQU84709	Sorghum	nucleus	39.05	25.28
PGSC0003DMT400032373	Potato	nucleus	39.7	24.7
AT5G65630.1	Thale cress	nucleus	31.02	24.24
Solyc07g062660.2.1	Tomato	nucleus	38.83	23.8
AT1G06230.2	Thale cress	nucleus	39.05	23.5
Zm00001d053427_P007	Maize	nucleus	34.06	22.99
AT2G34900.1	Thale cress	nucleus	18.87	22.54
AT3G52280.2	Thale cress	nucleus	17.57	20.98
Zm00001d039369_P004	Maize	plastid	37.53	18.46
AT5G14270.2	Thale cress	nucleus	24.51	16.4
AT3G01770.1	Thale cress	nucleus	21.26	15.81
AT3G27260.3	Thale cress	nucleus	24.95	13.99
AT5G46550.1	Thale cress	cytosol	14.97	13.97
AT5G63320.1	Thale cress	nucleus	26.68	11.59

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:843646	UniProt:A0A178W401	ProteinID:AAD55662.1
ProteinID:AAG52122.1	ProteinID:AEE35419.1	EMBL:AK228031	ProteinID:ANM57828.1	ArrayExpress:AT1G73150	EnsemblPlantsGene:AT1G73150
RefSeq:AT1G73150	TAIR:AT1G73150	RefSeq:AT1G73150-TAIR-G	EnsemblPlants:AT1G73150.1	TAIR:AT1G73150.1	EMBL:BT020256
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006325
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	Symbol:GTE3	InterPro:GTE_bromo
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf
RefSeq:NP_001320310.1	RefSeq:NP_177458.1	ProteinID:OAP13249.1	PFAM:PF00439	PFAM:PF17035	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	UniProt:Q9S7T1	SMART:SM00297	SUPFAM:SSF47370
UniParc:UPI00000AA618	SEG:seg	:	:	:	:

Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]

Coordinates

chr1:-:27503973..27506406

Molecular Weight (calculated)

50814.9 Da

IEP (calculated)

6.291

GRAVY (calculated)

-0.617

Length

461 amino acids

Sequence
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGHVAS TVRQEVNVGG SSSSNSSSSG SGSGSSGSDS DSSGHESDTG N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.