Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016131_P006 | Maize | nucleus | 81.7 | 83.16 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 61.93 | 66.82 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 61.93 | 66.61 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 61.93 | 66.51 |
| Os02t0250300-01 | Rice | nucleus | 63.25 | 65.85 |
| GSMUA_Achr11P... | Banana | nucleus | 33.09 | 53.43 |
| CDY15568 | Canola | nucleus | 20.79 | 44.8 |
| Zm00001d008922_P001 | Maize | plastid | 29.72 | 41.43 |
| PGSC0003DMT400027387 | Potato | nucleus | 34.41 | 40.8 |
| KRH22304 | Soybean | nucleus | 37.04 | 39.53 |
| KRH27020 | Soybean | nucleus | 37.34 | 39.47 |
| CDX82101 | Canola | nucleus | 10.54 | 39.34 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 34.26 | 39.2 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 20.35 | 39.15 |
| CDX82103 | Canola | plastid | 17.42 | 38.02 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 36.16 | 37.77 |
| Solyc10g008070.2.1 | Tomato | nucleus | 19.62 | 37.02 |
| CDY21732 | Canola | cytosol | 13.62 | 36.61 |
| CDX83890 | Canola | nucleus, plastid | 19.62 | 36.61 |
| CDX96751 | Canola | nucleus, plastid | 19.18 | 35.79 |
| CDY48040 | Canola | nucleus, plastid | 20.5 | 35.71 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 20.35 | 35.46 |
| CDY06203 | Canola | nucleus | 32.8 | 34.78 |
| CDY19175 | Canola | nucleus, plastid | 19.47 | 34.64 |
| Solyc12g014170.1.1 | Tomato | nucleus | 34.99 | 34.09 |
| AT1G73150.1 | Thale cress | plastid | 22.99 | 34.06 |
| CDY09981 | Canola | nucleus | 31.63 | 33.8 |
| CDY26215 | Canola | mitochondrion | 20.35 | 33.57 |
| Bra032431.1-P | Field mustard | nucleus | 32.21 | 33.49 |
| PGSC0003DMT400039787 | Potato | nucleus | 34.41 | 33.38 |
| Bra025948.1-P | Field mustard | mitochondrion | 20.2 | 33.33 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 14.93 | 32.8 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 20.94 | 32.5 |
| PGSC0003DMT400032373 | Potato | nucleus | 34.55 | 31.85 |
| Bra015485.1-P | Field mustard | nucleus | 34.7 | 31.64 |
| Solyc07g062660.2.1 | Tomato | nucleus | 34.7 | 31.52 |
| CDX86532 | Canola | nucleus | 32.5 | 31.49 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 22.11 | 31.01 |
| CDY66497 | Canola | nucleus | 6.88 | 30.32 |
| Bra030643.1-P | Field mustard | nucleus | 32.8 | 30.31 |
| AT1G06230.2 | Thale cress | nucleus | 33.24 | 29.63 |
| CDY68605 | Canola | cytosol | 23.28 | 28.96 |
| KRH25703 | Soybean | nucleus | 36.6 | 28.6 |
| CDY72432 | Canola | cytosol | 21.08 | 28.51 |
| CDY26219 | Canola | nucleus | 7.61 | 27.96 |
| Zm00001d002267_P001 | Maize | plastid | 18.45 | 27.94 |
| Zm00001d046528_P001 | Maize | cytosol | 5.86 | 26.67 |
| Zm00001d026333_P001 | Maize | cytosol | 18.01 | 26.11 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 10.4 | 25.82 |
| KRH55813 | Soybean | nucleus | 36.75 | 25.48 |
| Zm00001d049400_P001 | Maize | plastid | 17.72 | 25.0 |
| Zm00001d024251_P001 | Maize | cytosol | 17.28 | 24.23 |
| Zm00001d039369_P004 | Maize | plastid | 31.04 | 22.63 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 12.01 | 22.47 |
| Zm00001d035167_P001 | Maize | nucleus | 15.81 | 14.25 |
| Zm00001d017126_P001 | Maize | nucleus | 14.2 | 13.94 |
| Zm00001d049638_P009 | Maize | nucleus | 15.37 | 13.51 |
| Zm00001d004790_P008 | Maize | nucleus | 10.98 | 12.98 |
| Zm00001d053022_P001 | Maize | nucleus | 9.81 | 10.93 |
| Zm00001d021185_P001 | Maize | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:103654735 | MapMan:15.5.54 | UniProt:A0A1D6QPE6 | ProteinID:AQK59436.1 |
| ProteinID:AQK59443.1 | ProteinID:AQK59447.1 | ProteinID:AQK59448.1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 |
| InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 |
| PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI00084445B1 | EnsemblPlantsGene:Zm00001d053427 | EnsemblPlants:Zm00001d053427_P007 | EnsemblPlants:Zm00001d053427_T007 | SEG:seg |
Description
Transcription factor GTE4
Coordinates
chr4:-:230972578..230978467
Molecular Weight (calculated)
76277.6 Da
IEP (calculated)
10.300
GRAVY (calculated)
-0.626
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDPPGDGT SGEETAPGPA PAVEAPPAPA VPARSRWAAE IKVYTRKHPR KNPKPPPESA ADPVSVPSPA PNPLSETLSS IRRSIHRTEA VDAAALSDPA
101: APASVPTRAP SGERGAASGD PSSGLNRVGG GIPNGHGDDR AAAAAVKAEK ARKRRLRSEL RRCLAGELDQ VRVLSRRLKE AAEALAQQEA SEPVPLPLMV
201: LPTQQQVVDA GYVQHQFLAG DMAVPMPTQI AAAVTPARSL LHRRPLTVSV VHNEAFEKEK RTPKANQLYQ NSEFLLAKDR IPPSDSHVRK KPKHHKKKHR
301: SLESRGADFD AERRLYSHAF KKSSSLLSRL MKHKFGWVFN KPVDPVTLGL HDYFTIIKHP MDLGTIRGRL SRGQYRNPKE FAEDVRLTFH NAMTYNPKGQ
401: DVHFMAEQLL GIFEAQWPEI EAEVNYLASC PPLPKKFPPP PIDLRFLERS DSMRHHVALD TNSRPISHTP TYTRTPSMKK PRAKDPNKRD MTIDEKRKLS
501: ENLQNLPPVK LDAVVQVIKN KNLSVKQHDD EIEVEIDSMD AETLWELDRF VSNYKKNLSK QKRKAERAML ARQDAELRAQ HPIQQPQPTP VPQEPFGEKS
601: PKQVVKGYPY FLLYLKSTCT LQIRWKASNC QHLHQNKMVR IDRMRVVQAI QAAPAVAQDH LLVAQTVIAP LQMDLMLAIH LEI
101: APASVPTRAP SGERGAASGD PSSGLNRVGG GIPNGHGDDR AAAAAVKAEK ARKRRLRSEL RRCLAGELDQ VRVLSRRLKE AAEALAQQEA SEPVPLPLMV
201: LPTQQQVVDA GYVQHQFLAG DMAVPMPTQI AAAVTPARSL LHRRPLTVSV VHNEAFEKEK RTPKANQLYQ NSEFLLAKDR IPPSDSHVRK KPKHHKKKHR
301: SLESRGADFD AERRLYSHAF KKSSSLLSRL MKHKFGWVFN KPVDPVTLGL HDYFTIIKHP MDLGTIRGRL SRGQYRNPKE FAEDVRLTFH NAMTYNPKGQ
401: DVHFMAEQLL GIFEAQWPEI EAEVNYLASC PPLPKKFPPP PIDLRFLERS DSMRHHVALD TNSRPISHTP TYTRTPSMKK PRAKDPNKRD MTIDEKRKLS
501: ENLQNLPPVK LDAVVQVIKN KNLSVKQHDD EIEVEIDSMD AETLWELDRF VSNYKKNLSK QKRKAERAML ARQDAELRAQ HPIQQPQPTP VPQEPFGEKS
601: PKQVVKGYPY FLLYLKSTCT LQIRWKASNC QHLHQNKMVR IDRMRVVQAI QAAPAVAQDH LLVAQTVIAP LQMDLMLAIH LEI
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.