Factsheet for Zm00001d002267_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82367	Sorghum	nucleus	61.42	91.72
Zm00001d046528_P001	Maize	cytosol	28.6	86.0
Zm00001d026333_P001	Maize	cytosol	84.92	81.32
Os04t0622800-00	Rice	cytosol	47.01	68.17
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	68.29	67.54
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	69.18	66.81
TraesCS2B01G489500.1	Wheat	plastid	68.51	66.74
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	68.51	65.74
Zm00001d049400_P001	Maize	plastid	53.22	49.59
Zm00001d024251_P001	Maize	cytosol	51.88	48.05
CDY08771	Canola	nucleus	27.94	35.59
GSMUA_Achr1P15650_001	Banana	nucleus	37.69	34.55
KRH21702	Soybean	nucleus	40.13	34.09
KRH10646	Soybean	nucleus	39.47	33.65
KRH10648	Soybean	nucleus	39.47	33.21
CDX78390	Canola	nucleus	17.52	33.05
GSMUA_Achr3P00480_001	Banana	nucleus	38.14	32.95
VIT_03s0097g00570.t01	Wine grape	nucleus	39.91	32.61
CDX70356	Canola	nucleus, plastid	17.74	32.39
CDY65645	Canola	nucleus, plastid	35.26	31.24
Zm00001d008922_P001	Maize	plastid	33.92	31.22
CDY65656	Canola	cytosol	13.97	30.43
Bra024402.1-P	Field mustard	nucleus, plastid	35.92	29.72
PGSC0003DMT400008041	Potato	nucleus	38.58	28.9
Bra006068.1-P	Field mustard	nucleus	35.03	28.78
Solyc01g106280.2.1	Tomato	nucleus	38.36	28.74
AT5G10550.1	Thale cress	nucleus	36.81	28.57
AT5G65630.1	Thale cress	nucleus	36.59	27.97
Bra005311.1-P	Field mustard	cytosol, plastid	14.41	27.9
PGSC0003DMT400078795	Potato	nucleus	34.15	26.01
Solyc02g091660.2.1	Tomato	nucleus	30.82	25.98
CDX70357	Canola	plastid	19.51	22.39
Zm00001d016131_P006	Maize	nucleus	31.71	21.31
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	15.08	18.63
Zm00001d053427_P007	Maize	nucleus	27.94	18.45
Zm00001d017126_P001	Maize	nucleus	25.28	16.38
Zm00001d039369_P004	Maize	plastid	33.26	16.01
Zm00001d035167_P001	Maize	nucleus	23.28	13.85
Zm00001d049638_P009	Maize	nucleus	23.28	13.51
Zm00001d004790_P008	Maize	nucleus	15.52	12.11
Zm00001d053022_P001	Maize	nucleus	15.08	11.09
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	EntrezGene:100274549	MapMan:15.5.54	UniProt:B4G1V8	EMBL:BT043346
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487
InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	ProteinID:ONM13762.1
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF162	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI00017B7A66	EnsemblPlantsGene:Zm00001d002267	EnsemblPlants:Zm00001d002267_P001
EnsemblPlants:Zm00001d002267_T001	SEG:seg	:	:	:	:

Description

Transcription factor GTE7

Coordinates

chr2:+:9174693..9176754

Molecular Weight (calculated)

49130.9 Da

IEP (calculated)

6.868

GRAVY (calculated)

-0.653

Length

451 amino acids

Sequence
(BLAST)

001: MASALLAGQG GARHHGWGET RAPLAPIPPN PNPSQPHPRA DGSKSKPRAA ASSPAAGYVT FRPASLGPRE ARALRDRLAG ELTQVRALLS RIDTWQQQGP
101: PPAGLRGEVR KRCGQILTRL RKDKRSVWFN APVEVERLGL HDYHAVIKRP MDLGTVKEGL AAGRYASHDD FAADVRLTFT NALRYNPVGH EVHTFAGALL
201: AYFERMYKEA LACFEEDCKR PEPPRPVPPE LTPPPAAEPV EAKVKPRAGN VRMRKPKARE PNKREMSLEE KNMLRVGLES LPEEKMHNVL QIVRKRNNNP
301: EMLGDEIELD IDEMDVETQW ELDRFVANFN KALKKSQRAV VMNGGAADVT SAAVAENDTA PVSNVLTLVD NDDVEREKPV RSATMAEQVD EYVDIGDEMP
401: TATYQSMEIE KDAEGATGSR GSGSGSSSSS GSESRSSGDS ASGAGNAHSL A

Best Arabidopsis Sequence Match ( AT1G17790.1 )
(BLAST)

001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN

Arabidopsis Description

GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.