Factsheet for Zm00001d049400_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24660	Sorghum	plastid	91.32	89.84
Zm00001d024251_P001	Maize	cytosol	85.74	85.22
Os08t0192800-01	Rice	nucleus	70.45	70.89
Zm00001d002267_P001	Maize	plastid	49.59	53.22
Zm00001d046528_P001	Maize	cytosol	15.91	51.33
Zm00001d026333_P001	Maize	cytosol	48.14	49.47
CDY08771	Canola	nucleus	26.03	35.59
GSMUA_Achr1P15650_001	Banana	nucleus	34.92	34.35
CDX78390	Canola	nucleus	16.94	34.31
GSMUA_Achr3P00480_001	Banana	nucleus	36.78	34.1
CDX70356	Canola	nucleus, plastid	17.36	34.01
KRH10648	Soybean	nucleus	35.54	32.09
KRH21702	Soybean	nucleus	35.12	32.02
VIT_03s0097g00570.t01	Wine grape	nucleus	36.16	31.7
KRH10646	Soybean	nucleus	34.5	31.57
Zm00001d008922_P001	Maize	plastid	31.61	31.22
CDY65645	Canola	nucleus, plastid	32.64	31.04
Bra024402.1-P	Field mustard	nucleus, plastid	33.47	29.72
PGSC0003DMT400008041	Potato	nucleus	35.74	28.74
Solyc01g106280.2.1	Tomato	nucleus	35.74	28.74
CDY65656	Canola	cytosol	12.19	28.5
AT5G10550.1	Thale cress	nucleus	33.47	27.88
Bra006068.1-P	Field mustard	nucleus	31.41	27.69
AT5G65630.1	Thale cress	nucleus	33.47	27.46
Bra005311.1-P	Field mustard	cytosol, plastid	13.02	27.04
PGSC0003DMT400078795	Potato	nucleus	30.79	25.17
Solyc02g091660.2.1	Tomato	nucleus	27.48	24.86
Zm00001d016131_P006	Maize	nucleus	29.13	21.01
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	15.29	20.27
CDX70357	Canola	plastid	16.12	19.85
Zm00001d053427_P007	Maize	nucleus	25.0	17.72
Zm00001d017126_P001	Maize	nucleus	24.79	17.24
Zm00001d039369_P004	Maize	plastid	30.17	15.58
Zm00001d035167_P001	Maize	nucleus	22.31	14.25
Zm00001d049638_P009	Maize	nucleus	21.28	13.26
Zm00001d004790_P008	Maize	nucleus	14.46	12.11
Zm00001d053022_P001	Maize	nucleus	14.88	11.75
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	EntrezGene:100279725	MapMan:15.5.54	ProteinID:AQK50254.1	UniProt:B7ZZM1
EMBL:BT054763	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom
InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525
PANTHER:PTHR22880	PANTHER:PTHR22880:SF162	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0001917414	EnsemblPlantsGene:Zm00001d049400
EnsemblPlants:Zm00001d049400_P001	EnsemblPlants:Zm00001d049400_T001	SEG:seg	:	:	:

Description

Transcription factor GTE7

Coordinates

chr4:-:29282763..29284915

Molecular Weight (calculated)

53515.7 Da

IEP (calculated)

5.657

GRAVY (calculated)

-0.761

Length

484 amino acids

Sequence
(BLAST)

001: MTSAVLAGRN EVHQAHQHHR QWAGARVPLM PKPSSNPNPR RHRAGPNPIP SGSPPEPRAA PAVAAEPSPS PSGHLNFRPS EMTPAEARHL RARLTSELCR
101: VRAFLSRIDS WQDGQRRRRG PEPPARGPSP PPALVEAMRK RCADILMRLR RSKKSVWFNS PVDVEGLKLH DYRAIIRSPM DLGTVKQNLT AGRYPSHEAF
201: AGDVRLTFNN ALRYNPPDHH VHRYAGNLLA SFEGMYKEAV SWFEQQRQQL EPPMQPDLPP PPQLPVVSVP VQAPPRMGGG GRRPKPKARE PNKREMDEEE
301: KQKLRVEIEN LPEEKMLNVL QIVQKRNSDP AFTGEVVELD FDELDMETLW ELDRFVVNWR KALKKSQRNS MVNGDAAAAV NGDAIDVTVV PDDDDMVEVA
401: VNPSVAVEIG ESADVPEKEM EAEMVDDYVD IGDEMPTVNY QSVEIERDSP AAASSSSGSG SGSSSSSDSD SDSDSDGDDA SAPH

Best Arabidopsis Sequence Match ( AT1G06230.1 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.