Factsheet for Zm00001d008922_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G146600.1	Wheat	nucleus, plastid	78.98	76.48
Os01t0214300-01	Rice	cytosol, nucleus	25.71	75.9
TraesCS3B01G164100.1	Wheat	nucleus, plastid	78.98	75.88
TraesCS3A01G140500.1	Wheat	nucleus, plastid	78.78	75.69
CDY15568	Canola	nucleus	34.49	53.31
CDY66497	Canola	nucleus	15.92	50.32
CDX83890	Canola	nucleus, plastid	34.69	46.45
CDX96751	Canola	nucleus, plastid	34.08	45.63
Zm00001d039369_P004	Maize	plastid	85.31	44.61
CDY19175	Canola	nucleus, plastid	34.29	43.75
CDX82101	Canola	nucleus	15.92	42.62
Bra008074.1-P	Field mustard	nucleus, plastid	34.08	42.6
CDY26219	Canola	nucleus	16.12	42.47
CDY48040	Canola	nucleus, plastid	33.88	42.35
Bra025948.1-P	Field mustard	mitochondrion	35.51	42.03
CDY26215	Canola	mitochondrion	35.31	41.79
CDX82103	Canola	plastid	26.53	41.53
GSMUA_Achr1P11660_001	Banana	nucleus	42.86	40.94
Bra016586.1-P	Field mustard	nucleus, plastid	36.53	40.68
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	28.78	39.72
AT1G73150.1	Thale cress	plastid	37.35	39.7
VIT_19s0014g01650.t01	Wine grape	nucleus	47.35	38.86
AT1G17790.1	Thale cress	nucleus, plastid	38.16	38.4
KRH27020	Soybean	nucleus	50.0	37.93
PGSC0003DMT400027387	Potato	nucleus	44.29	37.67
KRH22304	Soybean	nucleus	49.18	37.66
VIT_12s0028g02510.t01	Wine grape	nucleus	49.39	37.0
CDY21732	Canola	cytosol	18.98	36.61
Solyc10g008070.2.1	Tomato	nucleus	26.53	35.91
PGSC0003DMT400061991	Potato	cytoskeleton, cytosol, nucleus	22.65	35.69
Zm00001d016131_P006	Maize	nucleus	48.16	35.17
Zm00001d002267_P001	Maize	plastid	31.22	33.92
CDY06203	Canola	nucleus	43.67	33.23
Bra032431.1-P	Field mustard	nucleus	43.88	32.72
CDY09981	Canola	nucleus	42.65	32.71
Zm00001d026333_P001	Maize	cytosol	30.82	32.06
Zm00001d046528_P001	Maize	cytosol	9.8	32.0
Zm00001d049400_P001	Maize	plastid	31.22	31.61
Solyc12g014170.1.1	Tomato	nucleus	43.88	30.67
PGSC0003DMT400032373	Potato	nucleus	46.33	30.63
PGSC0003DMT400039787	Potato	nucleus	43.88	30.54
Zm00001d024251_P001	Maize	cytosol	30.0	30.18
Zm00001d053427_P007	Maize	nucleus	41.43	29.72
CDX86532	Canola	nucleus	42.65	29.65
Bra015485.1-P	Field mustard	nucleus	44.29	28.97
Bra030643.1-P	Field mustard	nucleus	43.67	28.96
Solyc07g062660.2.1	Tomato	nucleus	43.67	28.46
CDX81848	Canola	cytosol, nucleus, plastid	15.92	28.36
AT1G06230.2	Thale cress	nucleus	43.06	27.55
KRH25703	Soybean	nucleus	48.37	27.12
KRH55813	Soybean	nucleus	48.37	24.06
CDY72432	Canola	cytosol	22.65	21.98
CDY68605	Canola	cytosol	24.08	21.49
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	15.92	21.37
Zm00001d017126_P001	Maize	nucleus	24.69	17.39
Zm00001d035167_P001	Maize	nucleus	26.12	16.89
Zm00001d049638_P009	Maize	nucleus	25.51	16.09
Zm00001d004790_P008	Maize	nucleus	15.92	13.49
Zm00001d053022_P001	Maize	nucleus	15.71	12.56
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	ProteinID:AQK91014.1	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353
InterPro:IPR036427	InterPro:IPR038336	UniProt:K7UZG6	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439
PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF181
SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI00022199FC	EnsemblPlantsGene:Zm00001d008922	EnsemblPlants:Zm00001d008922_P001	EnsemblPlants:Zm00001d008922_T001
SEG:seg	:	:	:	:	:

Description

Transcription factor GTE4

Coordinates

chr8:+:25303477..25309253

Molecular Weight (calculated)

53869.5 Da

IEP (calculated)

7.530

GRAVY (calculated)

-0.932

Length

490 amino acids

Sequence
(BLAST)

001: MASGTPSPSG KPYSRKSHAS SKAPSVPSFD AHNGRLLPTV TFPLPSTTAS RRELRRRLSS ELSQVRAAAK RLSSLPAPAP SSALSATDPS TPLPPHPPGS
101: KHKSRKPGGA PYPQPHLSAE ARRKLYAPVF KTCSALLQRL MKHKHSWVFN TPVDASALGL HDYHTIITKP MDLGTVKSKL AAGQYRSPRE FAGDVRLTFR
201: NAMTYNPKGQ DVHFMAEQLL NMFEEKWLEI EAELAQLSPQ PPTPSSAAPR KPKEIDNSRA LERSDSTVHA AGMEATPKTH NGRPPVSKKP KAREPNKRDM
301: TFWEKQRLSN NLQDLPPEKL DNVVQIIKKR NSSLNQHDDE IEVDIDSFDV ETLWELDRFV TNYRKSITKN KRKAELSAVR PDEADPDQEP EKVERVRQDE
401: ADQDRIPAVQ EPIPEPESVD VEPPKEIAAD DNGRYVGESS PGHLEDQEGE NPGRSSSSGS SSSDSGSSSS DTDTDSSSAD GSDAAQSPRT

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.