Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25703 | Soybean | nucleus | 80.41 | 90.62 |
| KRH22304 | Soybean | nucleus | 46.8 | 72.03 |
| KRH27020 | Soybean | nucleus | 46.7 | 71.21 |
| CDY15568 | Canola | nucleus | 20.3 | 63.09 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 38.27 | 57.65 |
| Solyc10g008070.2.1 | Tomato | nucleus | 21.12 | 57.46 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 25.28 | 55.7 |
| GSMUA_Achr11P... | Banana | nucleus | 23.65 | 55.08 |
| PGSC0003DMT400027387 | Potato | nucleus | 32.18 | 55.03 |
| CDY06203 | Canola | nucleus | 35.03 | 53.57 |
| CDY09981 | Canola | nucleus | 34.21 | 52.74 |
| Bra032431.1-P | Field mustard | nucleus | 34.82 | 52.21 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 26.5 | 50.78 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 8.43 | 50.0 |
| Bra015485.1-P | Field mustard | nucleus | 37.87 | 49.8 |
| CDX86532 | Canola | nucleus | 35.53 | 49.65 |
| AT1G06230.2 | Thale cress | nucleus | 38.07 | 48.96 |
| Zm00001d008922_P001 | Maize | plastid | 24.06 | 48.37 |
| Bra030643.1-P | Field mustard | nucleus | 36.24 | 48.31 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 23.45 | 45.65 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 23.45 | 45.29 |
| CDY68605 | Canola | cytosol | 25.18 | 45.17 |
| CDY72432 | Canola | cytosol | 23.15 | 45.15 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 23.35 | 45.1 |
| EES02258 | Sorghum | plastid | 20.2 | 44.62 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 23.15 | 44.44 |
| Os02t0250300-01 | Rice | nucleus | 29.14 | 43.75 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 27.21 | 42.34 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 27.31 | 42.3 |
| Zm00001d016131_P006 | Maize | nucleus | 28.43 | 41.73 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 26.8 | 41.57 |
| OQU84709 | Sorghum | nucleus | 29.54 | 40.87 |
| Zm00001d053427_P007 | Maize | nucleus | 25.48 | 36.75 |
| KRH10646 | Soybean | nucleus | 19.19 | 35.73 |
| KRH21702 | Soybean | nucleus | 18.78 | 34.84 |
| KRH10648 | Soybean | nucleus | 18.68 | 34.33 |
| KRH45305 | Soybean | nucleus | 9.34 | 25.07 |
| KRH37141 | Soybean | cytosol, nucleus | 6.9 | 24.91 |
| KRH12139 | Soybean | nucleus | 8.63 | 24.36 |
| KRH04734 | Soybean | nucleus | 9.14 | 23.75 |
| Zm00001d039369_P004 | Maize | plastid | 22.03 | 23.16 |
| KRH54219 | Soybean | nucleus | 17.77 | 22.21 |
| KRH63729 | Soybean | nucleus | 17.46 | 21.97 |
| KRH57199 | Soybean | nucleus | 16.04 | 21.38 |
| KRH07021 | Soybean | nucleus | 14.92 | 19.76 |
| KRG94435 | Soybean | nucleus | 14.62 | 19.41 |
| KRH07022 | Soybean | nucleus | 14.42 | 18.07 |
| KRH21136 | Soybean | nucleus | 10.05 | 17.49 |
| KRH11112 | Soybean | nucleus | 9.75 | 16.99 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:100780669 | MapMan:15.5.54 | UniProt:A0A0R0JUQ7 | EMBL:ACUP02004062 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G284000 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| EnsemblPlants:KRH55813 | ProteinID:KRH55813 | ProteinID:KRH55813.1 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 |
| PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 |
| SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0006EDAA88 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:-:47209732..47217255
Molecular Weight (calculated)
108504.0 Da
IEP (calculated)
4.867
GRAVY (calculated)
-1.073
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEPMVGGD DEAREKQRFG ERKVYTRRKV KKDPKAVASA IENNGTATST VTNDNSVSNS TVQKSNTGEA KSKSDNVSVQ PPARQQAVLE DGDSAQPKVG
101: SGLEDGNSGQ PQLEDQNMVQ TEVGSGLEDG NKAQPRGEDQ NMAQTQEGSR LEDENTAQPP GEDHNLAQTQ VNSRLEDGDM AQPQLDDQNM VQPQSEDQNM
201: AQSQSEDHIM AQPQSEDQNM AQPQSEDPNM VHPQSEDQNM AQPLMEDENT ALPQLEDENT AQPQLEDENT AQLQGSSKLE DENTAQPQVT SRSEEGNTAQ
301: PQMSSRSEEG NTAQPQMSSR SEEGNTAQPQ MSSRSEEGNT AQPQVSSRSE DGNTAQRQVS SRSDDGNTVQ LQVSSRTEDG NTAQPQVSSK LEGRKSPQPE
401: VNSRLEDGNS PRPQVNSSLD GNTVQPSAVL VSDDSRSRQP DEPSSLNVQQ QDDGPSSPNR QQEAVPSSRD LILGNGVAEP WRRDRIKINL ASKSKQQMRE
501: LRWKLESELG VVRSLVNRIE VKQRQVGGFG NSDVLIDSGI NNVGGAKRAH SEVASACVPR EPASTRPLHQ LSLSMLENGQ GICETVEKEK RTPKANQFYR
601: NSEFLLAKDK FPSAESNKKS KLNWKKQGGG EMGHGFGMGS KFFKSCSSLL EKLMRHKHGW VFNSPVDVET LGLHDYFTII THPMDLGTVK TRLNKNWYKS
701: PKEFAEDVRL TFRNAMTYNP QGQDVHIMAE LLSKIFEDRW AIIESDYNRE MRYGFDYRAA PPAPSPLSRR VSAFTPPPLD MRRILDRSDS MTQTPRLMSI
801: TPSSRTPAPK KPKAKDPHKR DMTFEEKQKL STNLQSLPSE KLDAIVQIIK KRNSALNQHD DEIEVDIDSV DAETLWELDR FVTNYKKSLS KNKRKAELAR
901: ARAEALQQNA IQKSQAPAMA EIPKETQTDE RSLPQPLPVQ GRNQADNGSR SSSSSSSSSD SGSSSSDSDS DSSSASGSDA GSQGT
101: SGLEDGNSGQ PQLEDQNMVQ TEVGSGLEDG NKAQPRGEDQ NMAQTQEGSR LEDENTAQPP GEDHNLAQTQ VNSRLEDGDM AQPQLDDQNM VQPQSEDQNM
201: AQSQSEDHIM AQPQSEDQNM AQPQSEDPNM VHPQSEDQNM AQPLMEDENT ALPQLEDENT AQPQLEDENT AQLQGSSKLE DENTAQPQVT SRSEEGNTAQ
301: PQMSSRSEEG NTAQPQMSSR SEEGNTAQPQ MSSRSEEGNT AQPQVSSRSE DGNTAQRQVS SRSDDGNTVQ LQVSSRTEDG NTAQPQVSSK LEGRKSPQPE
401: VNSRLEDGNS PRPQVNSSLD GNTVQPSAVL VSDDSRSRQP DEPSSLNVQQ QDDGPSSPNR QQEAVPSSRD LILGNGVAEP WRRDRIKINL ASKSKQQMRE
501: LRWKLESELG VVRSLVNRIE VKQRQVGGFG NSDVLIDSGI NNVGGAKRAH SEVASACVPR EPASTRPLHQ LSLSMLENGQ GICETVEKEK RTPKANQFYR
601: NSEFLLAKDK FPSAESNKKS KLNWKKQGGG EMGHGFGMGS KFFKSCSSLL EKLMRHKHGW VFNSPVDVET LGLHDYFTII THPMDLGTVK TRLNKNWYKS
701: PKEFAEDVRL TFRNAMTYNP QGQDVHIMAE LLSKIFEDRW AIIESDYNRE MRYGFDYRAA PPAPSPLSRR VSAFTPPPLD MRRILDRSDS MTQTPRLMSI
801: TPSSRTPAPK KPKAKDPHKR DMTFEEKQKL STNLQSLPSE KLDAIVQIIK KRNSALNQHD DEIEVDIDSV DAETLWELDR FVTNYKKSLS KNKRKAELAR
901: ARAEALQQNA IQKSQAPAMA EIPKETQTDE RSLPQPLPVQ GRNQADNGSR SSSSSSSSSD SGSSSSDSDS DSSSASGSDA GSQGT
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.