Factsheet for Bra015485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68605	Canola	cytosol	71.7	97.81
CDY72432	Canola	cytosol	60.35	89.5
Bra032431.1-P	Field mustard	nucleus	74.23	84.63
Bra030643.1-P	Field mustard	nucleus	78.64	79.7
AT1G06230.2	Thale cress	nucleus	81.44	79.63
KRH27020	Soybean	nucleus	44.73	51.86
KRH22304	Soybean	nucleus	44.19	51.72
Solyc10g008070.2.1	Tomato	nucleus	24.7	51.1
GSMUA_Achr10P...	Banana	nucleus, plastid	29.51	49.44
VIT_12s0028g02510.t01	Wine grape	nucleus	43.12	49.39
PGSC0003DMT400027387	Potato	nucleus	37.92	49.31
GSMUA_Achr11P...	Banana	nucleus	26.17	46.34
GSMUA_Achr7P09350_001	Banana	nucleus, plastid	30.84	44.94
Zm00001d008922_P001	Maize	plastid	28.97	44.29
EES02258	Sorghum	plastid	25.37	42.6
Bra025948.1-P	Field mustard	mitochondrion	23.36	42.27
KRH25703	Soybean	nucleus	49.27	42.22
TraesCS3D01G146600.1	Wheat	nucleus, plastid	28.44	42.09
Bra008074.1-P	Field mustard	nucleus, plastid	22.03	42.09
TraesCS3B01G164100.1	Wheat	nucleus, plastid	28.57	41.96
TraesCS3A01G140500.1	Wheat	nucleus, plastid	28.44	41.76
Os02t0250300-01	Rice	nucleus	36.18	41.31
GSMUA_Achr1P11660_001	Banana	nucleus	27.37	39.96
Zm00001d016131_P006	Maize	nucleus	35.38	39.49
HORVU6Hr1G045030.1	Barley	nucleus	33.11	39.18
Os01t0214300-01	Rice	cytosol, nucleus	8.68	39.16
HORVU6Hr1G045070.4	Barley	nucleus	33.24	39.15
Bra016586.1-P	Field mustard	nucleus, plastid	22.96	39.09
TraesCS6D01G177700.1	Wheat	cytosol, plastid	32.58	38.43
OQU84709	Sorghum	nucleus	36.18	38.06
KRH55813	Soybean	nucleus	49.8	37.87
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	17.62	37.18
Zm00001d053427_P007	Maize	nucleus	31.64	34.7
Bra038624.1-P	Field mustard	nucleus	10.01	30.99
Bra005311.1-P	Field mustard	cytosol, plastid	9.48	30.47
Bra024402.1-P	Field mustard	nucleus, plastid	21.23	29.17
Bra006068.1-P	Field mustard	nucleus	21.09	28.78
Zm00001d039369_P004	Maize	plastid	27.37	21.88
Bra012810.1-P	Field mustard	cytosol	9.88	20.79
Bra005383.1-P	Field mustard	nucleus	10.68	20.78
Bra025262.1-P	Field mustard	nucleus	13.89	19.22
Bra039088.1-P	Field mustard	nucleus	16.29	18.74
Bra022044.1-P	Field mustard	nucleus	12.15	17.33
Bra034451.1-P	Field mustard	cytosol	10.28	14.58
Bra035848.1-P	Field mustard	nucleus	15.09	9.49

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EnsemblPlantsGene:Bra015485	EnsemblPlants:Bra015485.1	EnsemblPlants:Bra015485.1-P
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M4DG62
InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002545303
SEG:seg	:	:	:	:	:

Description

AT1G06230 (E=6e-279) GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding

Coordinates

chrA10:-:1488482..1491003

Molecular Weight (calculated)

82245.9 Da

IEP (calculated)

5.823

GRAVY (calculated)

-0.800

Length

749 amino acids

Sequence
(BLAST)

001: MASEPVNDGG REKQSIRVYT RKGKGQRKQS PFFAFATDEI GKANNRLNPP ETVAPESSDP IAVEKTALET KSREDSTEAP SDKVIDKPHD DVSLGAADKS
101: VIQSVPGPLV QDDANTVVGE KSVEVPSQSF KTQDDVNTVV VDENSIKEPS ESLAQEEDVT TVVVDKKAID APSETLSVED INTVVVDKNP IEVSSENVVD
201: GVKEAHPENL PERDAPDAQQ TAGLTSDSAG ESMPMEEGVD GRIKIHVPSK SKQQKEEIRK KLEDQLNVVR GLVKRIEDKE GEIGAYDDSR LLASTGITNG
301: GGRILSGFAS AGLPREVIRT PRPLNQLSIS VLENTQGLSE HVEKEKRTPK ANQFYRNSEF LLGDKLPPTE SNKKSKSSAK KHGGEVGHGF GAGSKVFKNC
401: SALLERLMKH KHGWVFNAPV DVKALGLHDY FTIIEHPMDL GTVKSALTRN VYESPREFAE DVRLTFHNAM TYNPPGQDVH IMAQVLLQMF EERWAVIEAD
501: YNRQMRFVTS YEMNLPASTM RSRLGPTMPP PPINVRNTID RADWSSHHPD LQHPKPTTTP GRTPTSTTPS GRTPALKKPK ANEPNKRDMT YEEKQKLSGH
601: LQNLPPDKLD AIVQIVNKRN TAVKLQDEEI EVDIDSVDPE TLWELDRFVI NYKKGLSKKK RKAELANQAR AEAERNGQQQ MAPAPVAREF SREGGNTAKK
701: TLPTPLPSQV EKQNNETSRS SSSSSSSSSS SSSSDSDSDS SSSSGSDQT

Best Arabidopsis Sequence Match ( AT1G06230.2 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.