Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016131_P006 | Maize | nucleus | 85.96 | 91.21 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 65.03 | 73.14 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 65.17 | 72.96 |
| Os02t0250300-01 | Rice | nucleus | 67.13 | 72.87 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 64.61 | 72.44 |
| CDY15568 | Canola | nucleus | 24.3 | 54.57 |
| GSMUA_Achr11P... | Banana | nucleus | 32.3 | 54.37 |
| CDY66497 | Canola | nucleus | 11.24 | 51.61 |
| EES02258 | Sorghum | plastid | 29.78 | 47.53 |
| KRH22304 | Soybean | nucleus | 42.28 | 47.03 |
| KRH27020 | Soybean | nucleus | 42.13 | 46.44 |
| CDY26219 | Canola | nucleus | 11.94 | 45.7 |
| PGSC0003DMT400027387 | Potato | nucleus | 36.38 | 44.97 |
| CDX83890 | Canola | nucleus, plastid | 23.03 | 44.81 |
| Solyc10g008070.2.1 | Tomato | nucleus | 22.75 | 44.75 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 37.5 | 44.72 |
| CDX96751 | Canola | nucleus, plastid | 22.75 | 44.26 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 39.75 | 43.27 |
| CDY19175 | Canola | nucleus, plastid | 23.31 | 43.23 |
| CDY26215 | Canola | mitochondrion | 24.16 | 41.55 |
| CDY06203 | Canola | nucleus | 37.5 | 41.46 |
| Bra025948.1-P | Field mustard | mitochondrion | 24.02 | 41.3 |
| CDY48040 | Canola | nucleus, plastid | 22.61 | 41.07 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 22.47 | 40.82 |
| CDY09981 | Canola | nucleus | 36.52 | 40.69 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 17.7 | 40.51 |
| Bra032431.1-P | Field mustard | nucleus | 36.66 | 39.73 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 19.8 | 39.72 |
| CDX82101 | Canola | nucleus | 10.11 | 39.34 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 24.3 | 39.32 |
| AT1G73150.1 | Thale cress | plastid | 25.28 | 39.05 |
| CDX82103 | Canola | plastid | 17.13 | 38.98 |
| Solyc12g014170.1.1 | Tomato | nucleus | 37.5 | 38.09 |
| PGSC0003DMT400039787 | Potato | nucleus | 37.22 | 37.64 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 25.7 | 37.58 |
| CDY21732 | Canola | cytosol | 13.2 | 37.01 |
| PGSC0003DMT400032373 | Potato | nucleus | 37.78 | 36.3 |
| Bra015485.1-P | Field mustard | nucleus | 38.06 | 36.18 |
| CDX86532 | Canola | nucleus | 35.81 | 36.17 |
| KXG33001 | Sorghum | plastid | 11.52 | 36.12 |
| Bra030643.1-P | Field mustard | nucleus | 36.38 | 35.05 |
| Solyc07g062660.2.1 | Tomato | nucleus | 36.52 | 34.57 |
| AT1G06230.2 | Thale cress | nucleus | 36.8 | 34.2 |
| OQU82367 | Sorghum | nucleus | 14.04 | 33.11 |
| KRH25703 | Soybean | nucleus | 40.59 | 33.07 |
| KXG24660 | Sorghum | plastid | 20.65 | 29.88 |
| KRH55813 | Soybean | nucleus | 40.87 | 29.54 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 11.38 | 29.45 |
| CDY68605 | Canola | cytosol | 22.61 | 29.33 |
| CDY72432 | Canola | cytosol | 20.37 | 28.71 |
| EER87804 | Sorghum | nucleus | 11.52 | 23.7 |
| KXG24325 | Sorghum | nucleus | 18.26 | 18.36 |
| EER97261 | Sorghum | nucleus | 11.66 | 17.04 |
| EES07108 | Sorghum | nucleus | 16.85 | 16.88 |
| EES09391 | Sorghum | cytosol, mitochondrion, nucleus | 9.69 | 15.86 |
| EES09393 | Sorghum | nucleus | 11.94 | 14.05 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A1Z5RM92 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 |
| InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | EnsemblPlants:OQU84709 |
| ProteinID:OQU84709 | ProteinID:OQU84709.1 | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 | EnsemblPlantsGene:SORBI_3004G111000 | SUPFAM:SSF47370 |
| UniParc:UPI000B425020 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:10888231..10893986
Molecular Weight (calculated)
77299.8 Da
IEP (calculated)
10.054
GRAVY (calculated)
-0.851
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDPPGDGA GGEEPTPEPA PAVEAPPAPA VPPRSRWAEE IKVYTRKHPR KNPKPPPPEP APGPSPASAP APAPAPAPAP APAPAPAPAP APAPASAPVP
101: APAPAPVPAQ APNPLSETLS SIRRNIRRAE AAGAAARPDP AAPASAPTRT PSGERGAASG DPSSGLNRVG GRIPNGHGDD QAAAAAEKAE KARKRRVRSE
201: LRRRLAGELD QVRVLSKRLK EAAEALAQRE ASEPAPLPLM VLPTQQQVVE AGYVQPHFSA GDMAVPMSAQ VAAAVTPGRT LLQRRPLTVS VIHNEAFEKE
301: KRTPKANQLY QNSEFLLAKD RIPPADSHGR KKSKHHKKKH RSLESRGADF DAERRLYSHA FKKSSSLLSR LMKHKFGWVF NKPVDPVALG LHDYFTIIKH
401: PMDLGTIRGR LSHGQYRNPK EFAEDVRLTF HNAMTYNPKG QDVHFMAEQL SGIFEAQWPE IEAEVNYLAS CPPLPKKFPP PPIDLRFLER SDSMRHHMAL
501: DTNSRPISHT PTYTRTPSMK KPRAKDPNKR DMTIDEKRKL SENLQNLPPE KLDAVVQVIK NKNLSVMQHD DEIEVEIDSM DAETLWELDR FVANYKKNLS
601: KQKRKAERAM LARQDAELRA QHQHQHQHPI QPPQPISATQ EPVGEKSPKQ AAKDSLAGKQ PPTSAPEQNE ENRQNASSSS NSSSSSSDSG SSSSDSDSDS
701: SSSDGSDAGN SS
101: APAPAPVPAQ APNPLSETLS SIRRNIRRAE AAGAAARPDP AAPASAPTRT PSGERGAASG DPSSGLNRVG GRIPNGHGDD QAAAAAEKAE KARKRRVRSE
201: LRRRLAGELD QVRVLSKRLK EAAEALAQRE ASEPAPLPLM VLPTQQQVVE AGYVQPHFSA GDMAVPMSAQ VAAAVTPGRT LLQRRPLTVS VIHNEAFEKE
301: KRTPKANQLY QNSEFLLAKD RIPPADSHGR KKSKHHKKKH RSLESRGADF DAERRLYSHA FKKSSSLLSR LMKHKFGWVF NKPVDPVALG LHDYFTIIKH
401: PMDLGTIRGR LSHGQYRNPK EFAEDVRLTF HNAMTYNPKG QDVHFMAEQL SGIFEAQWPE IEAEVNYLAS CPPLPKKFPP PPIDLRFLER SDSMRHHMAL
501: DTNSRPISHT PTYTRTPSMK KPRAKDPNKR DMTIDEKRKL SENLQNLPPE KLDAVVQVIK NKNLSVMQHD DEIEVEIDSM DAETLWELDR FVANYKKNLS
601: KQKRKAERAM LARQDAELRA QHQHQHQHPI QPPQPISATQ EPVGEKSPKQ AAKDSLAGKQ PPTSAPEQNE ENRQNASSSS NSSSSSSDSG SSSSDSDSDS
701: SSSDGSDAGN SS
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.