CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	54.63	52.1
TraesCS3A01G234100.1	Wheat	cytosol, nucleus, plastid	45.37	47.91
TraesCS3A01G234600.1	Wheat	cytosol, nucleus, plastid	44.93	47.44
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	44.05	46.3
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	43.17	45.58
TraesCS3A01G234500.1	Wheat	cytosol	42.73	44.09
TraesCS3A01G234000.1	Wheat	cytosol	42.73	44.09
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	42.29	43.24
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	41.41	42.73
TraesCS5B01G052900.1	Wheat	plastid	41.85	39.92
EES02258	Sorghum	plastid	30.4	15.47
OQU82367	Sorghum	nucleus	17.62	13.24
EER87804	Sorghum	nucleus	19.82	13.01
EES09391	Sorghum	cytosol, mitochondrion, nucleus	23.79	12.41
KXG24660	Sorghum	plastid	26.43	12.2
OQU84709	Sorghum	nucleus	36.12	11.52
EER97261	Sorghum	nucleus	22.91	10.68
EES09393	Sorghum	nucleus	25.11	9.42
EES07108	Sorghum	nucleus	27.75	8.86
KXG24325	Sorghum	nucleus	24.67	7.91

Protein Annotations

EnsemblPlants:KXG33001	EnsemblPlantsGene:SORBI_3003G238400	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147
PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	ProteinID:KXG33001	ProteinID:KXG33001.1	SEG:seg
SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI00081ADD45	UniProt:A0A1B6Q510	MapMan:15.5.54	:

Description

hypothetical protein

Coordinates

chr3:-:57791557..57796167

Molecular Weight (calculated)

24656.1 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.564

Length

227 amino acids

Sequence
(BLAST)

001: MPRPKRPPPG FASEPRYPRP RPRTAAAASA PASAPASAPS PGGGAAGGGA GSCYDLSRAF GRCRALLDDL LRHDDGWVFD APVDARALGL RDYYTVVADP
101: MDLGTVLRRL ERRRYVYPTA FADDVRLTFR NAMSYNDEGD PVYESAAELS GIFEARWASI EAELPHPLPP DDKLPRLPVA RVPEKRDVRL RKKKGKMAGK
201: ADAAALDELD LLVPDPEHGA DSPMQDP

Best Arabidopsis Sequence Match ( AT1G17790.1 )
(BLAST)

001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN

Arabidopsis Description

GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.