CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004790_P008	Maize	nucleus	82.64	86.51
Zm00001d053022_P001	Maize	nucleus	80.33	79.28
EER97261	Sorghum	nucleus	51.74	64.27
EES09391	Sorghum	cytosol, mitochondrion, nucleus	26.94	37.47
KRH11112	Soybean	nucleus	26.94	28.85
KRH21136	Soybean	nucleus	26.45	28.27
VIT_10s0003g02240.t01	Wine grape	nucleus	26.28	27.75
AT5G46550.1	Thale cress	cytosol	22.64	27.73
Bra022044.1-P	Field mustard	nucleus	23.8	27.43
Solyc02g071510.2.1	Tomato	nucleus	26.61	27.43
PGSC0003DMT400018643	Potato	nucleus	26.78	26.73
CDY43984	Canola	endoplasmic reticulum	19.01	26.32
GSMUA_Achr4P27780_001	Banana	nucleus	28.43	25.52
KXG33001	Sorghum	plastid	9.42	25.11
KXG24325	Sorghum	nucleus	26.28	22.46
EES07108	Sorghum	nucleus	24.96	21.24
OQU82367	Sorghum	nucleus	8.26	16.56
EER87804	Sorghum	nucleus	9.42	16.47
EES02258	Sorghum	plastid	11.24	15.25
KXG24660	Sorghum	plastid	11.74	14.43
OQU84709	Sorghum	nucleus	14.05	11.94

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:8077574	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	UniProt:C5Y629
ncoils:Coil	EnsemblPlants:EES09393	ProteinID:EES09393	ProteinID:EES09393.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR036427	PFAM:PF00439	PRINTS:PR00503
PFscan:PS50014	PANTHER:PTHR22880	PANTHER:PTHR22880:SF230	SMART:SM00297	EnsemblPlantsGene:SORBI_3005G059100	SUPFAM:SSF47370
unigene:Sbi.7002	UniParc:UPI0001A866F2	RefSeq:XP_002450405.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:6101173..6105860

Molecular Weight (calculated)

67290.6 Da

IEP (calculated)

5.773

GRAVY (calculated)

-0.676

Length

605 amino acids

Sequence
(BLAST)

001: MMTQACKKRR GVYISSESGD SDTDSDVEGI KLCRKSGVPS ISTCQHQSSY KVKAASMKSS RMIRLCGNIV RKLIDHKGGW LFKEPVDPVL YGIPDYFDVI
101: HNPMDLGTVK NKLTKKQYVS IEEFAADVRL TFSNAMKYNP PENDVHKVAK ELNGIFDSEW ESVERKFRVQ NPVQEQQTMK AIKVRGIMDS KSTVPRELVA
201: CSNSKPLVAR GPVACSNLIA NKTLTDVLSS KVKIKFSVRS SERTSSKDIP VQAAGSKERS LNHSVPTGNK KASLNCTLPC TKENAKISRI RESDRSSGSI
301: GNGSLLCNDT STSPLASSAQ GEESYLHDEP LSPSKALRAA MLRSRFAGTI VKAQQKALLD HGKNIDPVKL KLEKERLEKR QQEEKARIEA QVKAAEAAAQ
401: RKFDEEMRMK REREREAARL ALRMMKKTVD IDNSDFLKEL ENFSETWQSN PPGKLIVDFI DGDLPPGLGS PLERLGLFMK NDFEDEVEQE MEDSGSPSMD
501: VDMRKDFQEG VGHEMQDSIS PVTVTSTKND LQGAEGHEME DSVSPSTVIE TKKGSEEERE HDIVDSISPS TVIDTKKDSE ETEHEMVDSV SPLMDVDTEE
601: GEISC

Best Arabidopsis Sequence Match ( AT3G01770.1 )
(BLAST)

001: MTVRNGGFPG DYNRNSFDSP GGCDDSPNAS KDDETFGVPR IVLPLSDLSS SERRKWIHTL RQELEQLRSF QKSVGDLLPI SKIVTSTPAS NVSRPKSFGM
101: SRCSTGPGKR VLPFTATKPE PVTTSTMLRM KQCESLLKRL MSQQHCWLFN TPVDVVKLNI PDYFTIIKHP MDLGTVKSKL TSGTYSSPSE FSADVRLTFR
201: NAMTYNPSDN NVYRFADTLS KFFEVRWKTI EKKSSGTKSE PSNLATLAHK DIAIPEPVAK KRKMNAVKRN SLLEPAKRVM TDEDRVKLGR DLGSLTEFPV
301: QIINFLRDHS SKEERSGDDE IEIDINDLSH DALFQLRDLF DEFLRENQKK DSNGEPCVLE LLHGSGPGNS LTQHCDGSEL EDEDVDIGNY EHPISHISTV
401: RTEKDSVGGL NQMEDASRGK LSLIEGADGH QDGNSAPKEK ELPPEKRYRA ALLKNRFADI ILKAQEITLN QNEKRDPETL QREKEELELQ KKKEKARLQA
501: EAKEAEEARR KAEAQEAKRK LELEREAARQ ALLEMEKSVE INENTRFLKD LELLKTVNTD QLRNLRDVGS ESDGLAVFGF GGSNPLEQLG LFMKHEEDED
601: ESDMLAFPDP GNEVEEGEID

Arabidopsis Description

GTE11Transcription factor GTE11 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.