Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21136 | Soybean | nucleus | 89.38 | 89.22 |
| VIT_10s0003g02240.t01 | Wine grape | nucleus | 47.43 | 46.77 |
| Solyc02g071510.2.1 | Tomato | nucleus | 34.87 | 33.56 |
| PGSC0003DMT400018643 | Potato | nucleus | 34.87 | 32.51 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 37.52 | 31.45 |
| EER97261 | Sorghum | nucleus | 27.08 | 31.42 |
| Bra022044.1-P | Field mustard | nucleus | 29.03 | 31.24 |
| AT5G46550.1 | Thale cress | cytosol | 27.26 | 31.17 |
| CDY43984 | Canola | endoplasmic reticulum | 23.01 | 29.75 |
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 28.32 | 29.63 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 28.14 | 28.96 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 27.96 | 28.88 |
| Zm00001d004790_P008 | Maize | nucleus | 29.2 | 28.55 |
| Os07t0507700-01 | Rice | nucleus | 29.73 | 27.95 |
| EES09393 | Sorghum | nucleus | 28.85 | 26.94 |
| Zm00001d053022_P001 | Maize | nucleus | 28.67 | 26.43 |
| KRH07021 | Soybean | nucleus | 32.92 | 25.0 |
| KRH57199 | Soybean | nucleus | 32.57 | 24.9 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 9.91 | 24.56 |
| KRG94435 | Soybean | nucleus | 31.68 | 24.12 |
| KRH63729 | Soybean | nucleus | 32.74 | 23.63 |
| KRH54219 | Soybean | nucleus | 32.92 | 23.6 |
| KRH07022 | Soybean | nucleus | 32.04 | 23.03 |
| HORVU7Hr1G118300.1 | Barley | cytosol | 28.14 | 22.33 |
| KRH45305 | Soybean | nucleus | 12.21 | 18.8 |
| KRH37141 | Soybean | cytosol, nucleus | 8.32 | 17.22 |
| KRH10646 | Soybean | nucleus | 15.22 | 16.26 |
| KRH04734 | Soybean | nucleus | 10.8 | 16.09 |
| KRH21702 | Soybean | nucleus | 15.04 | 16.01 |
| KRH12139 | Soybean | nucleus | 9.56 | 15.47 |
| KRH10648 | Soybean | nucleus | 14.51 | 15.3 |
| EES09391 | Sorghum | cytosol, mitochondrion, nucleus | 11.5 | 14.94 |
| KRH22304 | Soybean | nucleus | 16.46 | 14.53 |
| KRH27020 | Soybean | nucleus | 16.46 | 14.4 |
| KRH25703 | Soybean | nucleus | 17.35 | 11.21 |
| KRH55813 | Soybean | nucleus | 16.99 | 9.75 |
Protein Annotations
| Gene3D:1.20.920.10 | EntrezGene:100800689 | MapMan:15.5.54 | EMBL:ACUP02009184 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_15G089700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo |
| UniProt:I1MEZ0 | InterPro:IPR001487 | InterPro:IPR036427 | EnsemblPlants:KRH11112 | ProteinID:KRH11112 | ProteinID:KRH11112.1 |
| PFAM:PF00439 | PRINTS:PR00503 | PFscan:PS50014 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF153 | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI000233BBA2 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:6911340..6915396
Molecular Weight (calculated)
63281.2 Da
IEP (calculated)
8.319
GRAVY (calculated)
-0.757
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MIATETIVPS TKLKIKFSTK RMEVESGPKY EFGQKVSHTD ENRSFNLNGK SSALNSNKRG PPTSIEGQKE KRQRIDRKGS MQCATILKSL MSHTYSWVFS
101: KPVDPIALSI PDYFTIISHP MDLGTIKSKL EKNIYSGTEE FAADVRLTFS NAMKYNPPSN DVHLMAKELS KIFDRKWKDL GRKWKCEDEH DKSESETIKE
201: TGRKSLDMLS RHRDSLPKKT QVSEHKGMPK IRSLATKDAR VEPSKLSQIP CKLIEKDMHK GNKGNHDVEQ PAGSLKACSS VCFVTSKCRI CGDTTCHCVI
301: PSNSIQVSSD ISSEGSEGGD VITRGADSLR QNCPTKCTSP IEKKSDPDSD GAVSSLDSEH VCPSSQHVTP TTDASSGEVW STPVLPVQLS PKKALRAAML
401: KSRFADTILK AQQKTLLDHG DKGNPQKMQQ EKERLERIQR EERARIEAQI KIAEAAARMR AEEESRQRRE KEREAARAAI EKMKRTVDIE HNVEIIKELE
501: SLSGCTLSYK AVGCRNGYKV ALETLDKPQF ENPLERLGLF IKEDFTADED EEVLNGGFEE GEIFN
101: KPVDPIALSI PDYFTIISHP MDLGTIKSKL EKNIYSGTEE FAADVRLTFS NAMKYNPPSN DVHLMAKELS KIFDRKWKDL GRKWKCEDEH DKSESETIKE
201: TGRKSLDMLS RHRDSLPKKT QVSEHKGMPK IRSLATKDAR VEPSKLSQIP CKLIEKDMHK GNKGNHDVEQ PAGSLKACSS VCFVTSKCRI CGDTTCHCVI
301: PSNSIQVSSD ISSEGSEGGD VITRGADSLR QNCPTKCTSP IEKKSDPDSD GAVSSLDSEH VCPSSQHVTP TTDASSGEVW STPVLPVQLS PKKALRAAML
401: KSRFADTILK AQQKTLLDHG DKGNPQKMQQ EKERLERIQR EERARIEAQI KIAEAAARMR AEEESRQRRE KEREAARAAI EKMKRTVDIE HNVEIIKELE
501: SLSGCTLSYK AVGCRNGYKV ALETLDKPQF ENPLERLGLF IKEDFTADED EEVLNGGFEE GEIFN
001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
Arabidopsis Description
GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.