Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071510.2.1 | Tomato | nucleus | 92.08 | 95.06 |
| VIT_10s0003g02240.t01 | Wine grape | nucleus | 33.0 | 34.9 |
| KRH11112 | Soybean | nucleus | 32.51 | 34.87 |
| KRH21136 | Soybean | nucleus | 31.85 | 34.1 |
| EER97261 | Sorghum | nucleus | 25.41 | 31.62 |
| AT5G46550.1 | Thale cress | cytosol | 25.08 | 30.77 |
| Bra022044.1-P | Field mustard | nucleus | 26.24 | 30.29 |
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 26.73 | 30.0 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 26.73 | 29.51 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 26.57 | 29.43 |
| CDY43984 | Canola | endoplasmic reticulum | 20.79 | 28.83 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 31.68 | 28.49 |
| Os07t0507700-01 | Rice | nucleus | 27.89 | 28.12 |
| Zm00001d004790_P008 | Maize | nucleus | 26.57 | 27.85 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 10.23 | 27.19 |
| EES09393 | Sorghum | nucleus | 26.73 | 26.78 |
| PGSC0003DMT400052108 | Potato | nucleus | 31.68 | 26.34 |
| Zm00001d053022_P001 | Maize | nucleus | 25.74 | 25.45 |
| PGSC0003DMT400039290 | Potato | nucleus | 32.01 | 24.68 |
| HORVU7Hr1G118300.1 | Barley | cytosol | 26.24 | 22.33 |
| PGSC0003DMT400044321 | Potato | nucleus | 12.05 | 19.36 |
| PGSC0003DMT400027387 | Potato | nucleus | 18.32 | 19.27 |
| PGSC0003DMT400008041 | Potato | nucleus | 17.0 | 17.11 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 8.75 | 17.04 |
| EES09391 | Sorghum | cytosol, mitochondrion, nucleus | 11.72 | 16.32 |
| PGSC0003DMT400078795 | Potato | nucleus | 15.18 | 15.54 |
| PGSC0003DMT400032373 | Potato | nucleus | 16.5 | 13.5 |
| PGSC0003DMT400039787 | Potato | nucleus | 15.68 | 13.49 |
| PGSC0003DMT400061998 | Potato | cytosol | 2.31 | 11.97 |
Protein Annotations
| Gene3D:1.20.920.10 | EntrezGene:102580432 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001487 | InterPro:IPR036427 | UniProt:M1AAY1 |
| PFAM:PF00439 | EnsemblPlantsGene:PGSC0003DMG400007228 | PGSC:PGSC0003DMG400007228 | EnsemblPlants:PGSC0003DMT400018643 | PRINTS:PR00503 | PFscan:PS50014 |
| PANTHER:PTHR22880 | PANTHER:PTHR22880:SF153 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0002955A8B | RefSeq:XP_006355569.1 |
| SEG:seg | : | : | : | : | : |
Description
Global transcription factor group [Source:PGSC_GENE;Acc:PGSC0003DMG400007228]
Coordinates
chr2:-:30776177..30782328
Molecular Weight (calculated)
68253.2 Da
IEP (calculated)
8.708
GRAVY (calculated)
-0.622
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNAQSPKVN SSLHLLELPT MNIGDSIVTK KLKIKISSKG MRTEPRGSSE MSIKVKLPMP PDSKKREPPL VIDNGREKRR KMDRSVKQQC VNILKVLMVH
101: PSGWPFLLPV DPIQYNIPDY FTIIRKPMDL GTVKAKLDGN LYFDVDEFAA DVRLTFANAM KYNPPNNDFH LMAKRLDNIF NQRWKSLEGK WKAESKKISQ
201: DCVSSGKENH SKNTRETFFK KAAPCANGLN KRSMPLEEKQ KLKKELVDLL RGNVIKNMQN ALQKFGLMGL KEEMVNLDLE KYDDDTLLEL KRVVRAYSNL
301: TTEKAEPASV KQSGGCLSSM EPVPKDSSTS FICSVKTKRQ ANIVACHLQG VDTHALPRNF PTKRKLDQDH SGVAKRDREV TNSLASVPCL TDLNSHGGRG
401: SLHEENPCSS PGRSTCASAV PYGEGWDPLM NIDLSPTKAL RAAMLKSRFA DTIIKAKQKS LPVDCDKADL HRMQLERAQL EKQQLEEKAR IEAELKAAEV
501: ASRRKAEADL KLQRERQREA ARIALQKMER TVEFEDNLKI LRDLEKLCKC CSEAENLSGN GDGFTIILGE NPLERLGLCI KEDYLYDDED EDAILSGGDW
601: EDGEIL
101: PSGWPFLLPV DPIQYNIPDY FTIIRKPMDL GTVKAKLDGN LYFDVDEFAA DVRLTFANAM KYNPPNNDFH LMAKRLDNIF NQRWKSLEGK WKAESKKISQ
201: DCVSSGKENH SKNTRETFFK KAAPCANGLN KRSMPLEEKQ KLKKELVDLL RGNVIKNMQN ALQKFGLMGL KEEMVNLDLE KYDDDTLLEL KRVVRAYSNL
301: TTEKAEPASV KQSGGCLSSM EPVPKDSSTS FICSVKTKRQ ANIVACHLQG VDTHALPRNF PTKRKLDQDH SGVAKRDREV TNSLASVPCL TDLNSHGGRG
401: SLHEENPCSS PGRSTCASAV PYGEGWDPLM NIDLSPTKAL RAAMLKSRFA DTIIKAKQKS LPVDCDKADL HRMQLERAQL EKQQLEEKAR IEAELKAAEV
501: ASRRKAEADL KLQRERQREA ARIALQKMER TVEFEDNLKI LRDLEKLCKC CSEAENLSGN GDGFTIILGE NPLERLGLCI KEDYLYDDED EDAILSGGDW
601: EDGEIL
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.