Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11112 | Soybean | nucleus | 89.22 | 89.38 |
| VIT_10s0003g02240.t01 | Wine grape | nucleus | 46.11 | 45.55 |
| Solyc02g071510.2.1 | Tomato | nucleus | 34.1 | 32.88 |
| PGSC0003DMT400018643 | Potato | nucleus | 34.1 | 31.85 |
| Bra022044.1-P | Field mustard | nucleus | 28.8 | 31.05 |
| EER97261 | Sorghum | nucleus | 26.68 | 31.01 |
| AT5G46550.1 | Thale cress | cytosol | 27.03 | 30.97 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 36.75 | 30.86 |
| CDY43984 | Canola | endoplasmic reticulum | 22.61 | 29.29 |
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 27.74 | 29.07 |
| TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 27.56 | 28.42 |
| TraesCS7B01G461100.3 | Wheat | nucleus, plastid | 27.39 | 28.34 |
| Zm00001d004790_P008 | Maize | nucleus | 28.62 | 28.03 |
| Os07t0507700-01 | Rice | nucleus | 29.15 | 27.45 |
| EES09393 | Sorghum | nucleus | 28.27 | 26.45 |
| Zm00001d053022_P001 | Maize | nucleus | 28.09 | 25.94 |
| KRH07021 | Soybean | nucleus | 32.86 | 25.0 |
| KRH57199 | Soybean | nucleus | 32.51 | 24.9 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 9.89 | 24.56 |
| KRG94435 | Soybean | nucleus | 31.63 | 24.12 |
| KRH63729 | Soybean | nucleus | 32.33 | 23.37 |
| KRH54219 | Soybean | nucleus | 32.51 | 23.35 |
| KRH07022 | Soybean | nucleus | 32.16 | 23.16 |
| HORVU7Hr1G118300.1 | Barley | cytosol | 27.56 | 21.91 |
| KRH45305 | Soybean | nucleus | 11.84 | 18.26 |
| KRH37141 | Soybean | cytosol, nucleus | 8.3 | 17.22 |
| KRH10646 | Soybean | nucleus | 15.72 | 16.82 |
| KRH21702 | Soybean | nucleus | 15.19 | 16.2 |
| KRH04734 | Soybean | nucleus | 10.78 | 16.09 |
| KRH12139 | Soybean | nucleus | 9.89 | 16.05 |
| KRH10648 | Soybean | nucleus | 14.84 | 15.67 |
| EES09391 | Sorghum | cytosol, mitochondrion, nucleus | 11.84 | 15.4 |
| KRH22304 | Soybean | nucleus | 16.78 | 14.84 |
| KRH27020 | Soybean | nucleus | 16.78 | 14.71 |
| KRH25703 | Soybean | nucleus | 18.02 | 11.67 |
| KRH55813 | Soybean | nucleus | 17.49 | 10.05 |
Protein Annotations
| Gene3D:1.20.920.10 | EntrezGene:100803138 | MapMan:15.5.54 | EMBL:ACUP02008340 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_13G222500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo |
| UniProt:I1M1L5 | InterPro:IPR001487 | InterPro:IPR036427 | ProteinID:KRH21135.1 | EnsemblPlants:KRH21136 | ProteinID:KRH21136 |
| ProteinID:KRH21136.1 | PFAM:PF00439 | PRINTS:PR00503 | PFscan:PS50014 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF153 |
| SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI000233AAF3 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:-:33531556..33536303
Molecular Weight (calculated)
64055.2 Da
IEP (calculated)
8.745
GRAVY (calculated)
-0.801
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MIATETIVPS TKLKIKFSTK RIEIDSGPKC EFGQKVYHND KNRRCNSNEN SSALNSNKRG PPVSVEGQKE KRQKIDRKGS MQCATILKSL MSHSYSWVFL
101: KPVDPVALSI PDYFTIISHP MDLGTIKSKL ERNIYSGTEE FADDVRLTFS NAMKYNPPGN DVHMMAKELS KIFDRKWKDF GRKWKFEDEH DKSETETIKE
201: TGRKSLDAML PRHKDSLPKK TQLFEHKGMH KIRSLATKDA RVETPKLSQI PCKLIEKDLH KGSKGNHDVE QPAGSLKSYF SVRFVTSKCR ICGNIICHCE
301: NPSNSTQVSS DISSEGSEGR DLIARGADSL RQDCRTKCTS PMEKKSDLDS DGAVSSLDSE HVCPSSQHVT PTTDASSGEV WSMPVLPVQL SPKKALRAAI
401: LKSRFADTIL KAQQKTLLDH GDKGNPQKMQ QEKERLERIQ REERARIEAQ IKTAEAAARM RAEEESRQRR EKEREASRAA IEKMKRTVDI EHNMEIIKEL
501: ESLSGCTLSY KAVGGRNGYK VALETLDKHQ FENPLERLGL FIKEDFTTDL DEEVLNGGFE EGEIFN
101: KPVDPVALSI PDYFTIISHP MDLGTIKSKL ERNIYSGTEE FADDVRLTFS NAMKYNPPGN DVHMMAKELS KIFDRKWKDF GRKWKFEDEH DKSETETIKE
201: TGRKSLDAML PRHKDSLPKK TQLFEHKGMH KIRSLATKDA RVETPKLSQI PCKLIEKDLH KGSKGNHDVE QPAGSLKSYF SVRFVTSKCR ICGNIICHCE
301: NPSNSTQVSS DISSEGSEGR DLIARGADSL RQDCRTKCTS PMEKKSDLDS DGAVSSLDSE HVCPSSQHVT PTTDASSGEV WSMPVLPVQL SPKKALRAAI
401: LKSRFADTIL KAQQKTLLDH GDKGNPQKMQ QEKERLERIQ REERARIEAQ IKTAEAAARM RAEEESRQRR EKEREASRAA IEKMKRTVDI EHNMEIIKEL
501: ESLSGCTLSY KAVGGRNGYK VALETLDKHQ FENPLERLGL FIKEDFTTDL DEEVLNGGFE EGEIFN
001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL
Arabidopsis Description
GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.