Factsheet for TraesCS7D01G526000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G539800.2	Wheat	nucleus, plastid	96.67	95.08
TraesCS7B01G461100.3	Wheat	nucleus, plastid	95.56	94.33
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	32.41	76.75
HORVU7Hr1G118300.1	Barley	cytosol	94.07	71.35
EER97261	Sorghum	nucleus	60.19	66.74
Zm00001d004790_P008	Maize	nucleus	64.44	60.21
Os07t0507700-01	Rice	nucleus	66.11	59.4
Zm00001d053022_P001	Maize	nucleus	63.7	56.12
KRH11112	Soybean	nucleus	29.63	28.32
KRH21136	Soybean	nucleus	29.07	27.74
Bra022044.1-P	Field mustard	nucleus	26.48	27.24
AT5G46550.1	Thale cress	cytosol	24.81	27.13
Solyc02g071510.2.1	Tomato	nucleus	29.44	27.09
CDY43984	Canola	endoplasmic reticulum	21.85	27.0
VIT_10s0003g02240.t01	Wine grape	nucleus	28.52	26.88
PGSC0003DMT400018643	Potato	nucleus	30.0	26.73
GSMUA_Achr4P27780_001	Banana	nucleus	30.74	24.63
TraesCS6D01G196600.3	Wheat	nucleus	30.19	23.19
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	9.26	23.15
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	9.44	22.97
TraesCS3D01G087900.4	Wheat	nucleus	29.07	21.93
TraesCS3D01G124100.1	Wheat	nucleus	28.52	21.6
TraesCS7D01G309100.1	Wheat	nucleus	28.7	20.67
TraesCS3D01G146600.1	Wheat	nucleus, plastid	16.3	17.39
TraesCS7D01G074500.1	Wheat	cytosol	10.19	15.67
TraesCS1D01G373000.1	Wheat	cytosol	10.19	15.32
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	12.59	14.47
TraesCS6D01G177700.1	Wheat	cytosol, plastid	16.48	14.02

Protein Annotations

EnsemblPlants:TraesCS7D01G526000.1	EnsemblPlantsGene:TraesCS7D01G526000	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	ncoils:Coil	PANTHER:PTHR22880
PANTHER:PTHR22880:SF230	PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	SEG:seg	SMART:SM00297
SUPFAM:SSF47370	MapMan:15.5.54	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:621482985..621487364

Molecular Weight (calculated)

59247.1 Da

IEP (calculated)

7.785

GRAVY (calculated)

-0.646

Length

540 amino acids

Sequence
(BLAST)

001: MKPEVTAHLP KSESTKPITM TTQACKRRRS VYISSGSEDS GTDSEVEGSK RSQKSGTTSI SSSEHRPSSN NKAGSMNASK TRVCRNILGK LMDHPGGWLF
101: HKPVDPDLFG IPDYFDVIRN PMDLGTVKKK LTNKNYSSTD EFAADVRLTF SNAMTYNPPG NQVHTVAEQL NIMFNSEWTS YERKWSDRNL KPVQLPMKVI
201: KARVAVNSKP VVSGGLVACS NSSAKKTLTN AISSKVKIKF CVRGSGQTLS KGVNETPLQA AGSKEGSLNH SIPCTKESAN TTKVQSSEHR VQSIGNESRS
301: CSDTSTSPLS SYGQGDGSYL QAEPLSPTKA LRAAMLKRRF AGTIVKAQQK ALLDHGQQID PAKLQLEKER LEKRQQEEKE RIEAQVKAAE AAAQFKLDEE
401: LRKKRERERE AARLALHMMK KTVDIDNSDF LKDLENISKK WELNPPAKLI VDFVDGMELP PGLGSPLERL GLFMKRDIEE EVEDEMEDSV SPPSVDVDSV
501: SPPSVDAHSI SPPSVDVNSI LPPAVDMDID GEEGEIGCCG

Best Arabidopsis Sequence Match ( AT5G46550.1 )
(BLAST)

001: MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI
101: PDYFNVIQKP MDLGTVKSKL LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW NEVREGYKRQ PVERDCSRRS
201: STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
301: ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA
401: ERMRAQDELK QKRESQRLEI AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF DAMRMDDLEE GEIL

Arabidopsis Description

GTE12Transcription factor GTE12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.