Factsheet for TraesCS2D01G466700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	95.74	96.36
TraesCS2B01G489500.1	Wheat	plastid	94.04	95.46
Zm00001d046528_P001	Maize	cytosol	24.04	75.33
OQU82367	Sorghum	nucleus	46.6	72.52
Os04t0622800-00	Rice	cytosol	46.17	69.77
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	67.23	69.3
Zm00001d002267_P001	Maize	plastid	65.74	68.51
Zm00001d026333_P001	Maize	cytosol	64.04	63.91
CDY08771	Canola	nucleus	26.81	35.59
GSMUA_Achr1P15650_001	Banana	nucleus	36.6	34.96
KRH21702	Soybean	nucleus	39.36	34.84
KRH10646	Soybean	nucleus	38.51	34.22
KRH10648	Soybean	nucleus	38.94	34.14
GSMUA_Achr3P00480_001	Banana	nucleus	37.87	34.1
VIT_03s0097g00570.t01	Wine grape	nucleus	38.94	33.15
CDX70356	Canola	nucleus, plastid	16.38	31.17
CDY65645	Canola	nucleus, plastid	33.62	31.04
CDX78390	Canola	nucleus	15.74	30.96
PGSC0003DMT400008041	Potato	nucleus	38.3	29.9
Bra024402.1-P	Field mustard	nucleus, plastid	34.47	29.72
CDY65656	Canola	cytosol	12.98	29.47
Solyc01g106280.2.1	Tomato	nucleus	37.66	29.4
TraesCS3D01G235000.1	Wheat	cytosol, nucleus, plastid	13.4	29.17
TraesCS3D01G146600.1	Wheat	nucleus, plastid	30.85	28.66
AT5G65630.1	Thale cress	nucleus	35.53	28.31
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	12.98	27.48
Bra005311.1-P	Field mustard	cytosol, plastid	13.62	27.47
AT5G10550.1	Thale cress	nucleus	33.4	27.02
Bra006068.1-P	Field mustard	nucleus	31.06	26.59
PGSC0003DMT400078795	Potato	nucleus	31.7	25.17
Solyc02g091660.2.1	Tomato	nucleus	28.3	24.86
TraesCS6D01G177700.1	Wheat	cytosol, plastid	30.0	22.2
CDX70357	Canola	plastid	17.87	21.37
TraesCS1D01G373000.1	Wheat	cytosol	15.11	19.78
TraesCS7D01G074500.1	Wheat	cytosol	14.47	19.37
TraesCS6D01G196600.3	Wheat	nucleus	26.38	17.64
TraesCS3D01G087900.4	Wheat	nucleus	26.38	17.32
TraesCS3D01G124100.1	Wheat	nucleus	25.96	17.11
TraesCS7D01G309100.1	Wheat	nucleus	21.91	13.73
TraesCS7D01G526000.1	Wheat	nucleus, plastid	14.47	12.59

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF162	SMART:SM00297	SUPFAM:SSF47370
EnsemblPlantsGene:TraesCS2D01G466700	EnsemblPlants:TraesCS2D01G466700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:572072801..572075701

Molecular Weight (calculated)

51096.5 Da

IEP (calculated)

6.808

GRAVY (calculated)

-0.528

Length

470 amino acids

Sequence
(BLAST)

001: MASALIAGRR AQSHHWGDNR GPLAPAPSPN PGHRALPPAD GSRAQHPLAS PGVGYVTFRP SGLTHREAGA LRDRLAGELG QVRALLSRID AWQQELELEQ
101: QRPQPPRRGQ AREDGLPAPP PKLRAAMRKR CAQILSKLRK DKRSIWFNAP VEVETLGLHD YHAVIKSPMD LGTVKANLAA RKYPSHDAFA TDVRLTFSNA
201: LRYNPAGHTV HTFAGDLLAS FEKMYAAAVS WFEEECRRLP SPVPVPVPVP VPVRAELPPP VVPLPAQVKP RAVRMPKPKA RELNKRQMSL EEKNMLRAGL
301: ESLPEEKMHN VLQIVRKRNV NNPELLGDEI ELDIDEMDIE TQWELDRFVN NFNKALKKSR RAAMINGDIA DVNNADGAGA VNGAVPVLVD HADVESENPE
401: NTVVPEQVDE YVDIDDEMPT ATYQSVEIEK GAEATSVSGG SGSGSSSSSG SGSGSSGDST SEAANARPLV

Best Arabidopsis Sequence Match ( AT1G17790.1 )
(BLAST)

001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN

Arabidopsis Description

GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.