Factsheet for TraesCS3D01G235000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G234100.1	Wheat	cytosol, nucleus, plastid	93.52	93.95
TraesCS3A01G234600.1	Wheat	cytosol, nucleus, plastid	93.52	93.95
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	93.06	93.49
TraesCS3D01G234900.1	Wheat	cytosol, nucleus, plastid	81.02	78.83
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	55.09	50.0
KXG33001	Sorghum	plastid	46.3	44.05
TraesCS3D01G146600.1	Wheat	nucleus, plastid	35.65	15.22
TraesCS7D01G074500.1	Wheat	cytosol	23.15	14.24
TraesCS1D01G373000.1	Wheat	cytosol	22.69	13.65
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	29.17	13.4
TraesCS6D01G177700.1	Wheat	cytosol, plastid	37.5	12.76
TraesCS7D01G526000.1	Wheat	nucleus, plastid	23.15	9.26
TraesCS3D01G124100.1	Wheat	nucleus	28.24	8.56
TraesCS6D01G196600.3	Wheat	nucleus	27.78	8.53
TraesCS7D01G309100.1	Wheat	nucleus	28.24	8.13
TraesCS3D01G087900.4	Wheat	nucleus	26.85	8.1

Protein Annotations

EnsemblPlants:TraesCS3D01G235000.1	EnsemblPlantsGene:TraesCS3D01G235000	Gene3D:1.20.920.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:IPR001487	InterPro:IPR036427	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147
PFAM:PF00439	PFscan:PS50014	PRINTS:PR00503	SEG:seg	SMART:SM00297	SUPFAM:SSF47370
MapMan:15.5.54	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:324395422..324397876

Molecular Weight (calculated)

24248.3 Da

IEP (calculated)

7.345

GRAVY (calculated)

-0.333

Length

216 amino acids

Sequence
(BLAST)

001: MPSQSSPAGA PPGFPKPMCY PAAADLPRAL ERCRMLLDRL LQHEDGWVFA KPVDTYKLGL RDYHSIIAEP MDLGTVSRRL ELRRYPNLLC FAKDVRRTFS
101: NAMTYNNKGD DVYESAAKLS RIFESGWVSI LAALPSPPPV AVRRARLKDE LPRLPVDLQE KAAIIMKDIG GWIQEVDGRV EVDLDKADEA TLDKLEWLLA
201: LATMRKEAGA LDNQTR

Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.