Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G045030.1 | Barley | nucleus | 94.96 | 95.26 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 94.8 | 94.65 |
| Os02t0250300-01 | Rice | nucleus | 73.86 | 71.49 |
| Zm00001d016131_P006 | Maize | nucleus | 70.71 | 66.92 |
| OQU84709 | Sorghum | nucleus | 72.44 | 64.61 |
| Zm00001d053427_P007 | Maize | nucleus | 66.61 | 61.93 |
| CDY15568 | Canola | nucleus | 26.61 | 53.31 |
| GSMUA_Achr11P... | Banana | nucleus | 33.54 | 50.35 |
| CDY66497 | Canola | nucleus | 11.5 | 47.1 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 34.8 | 43.68 |
| CDY26219 | Canola | nucleus | 12.6 | 43.01 |
| CDX83890 | Canola | nucleus, plastid | 24.72 | 42.9 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 39.37 | 41.88 |
| PGSC0003DMT400027387 | Potato | nucleus | 37.95 | 41.84 |
| CDX96751 | Canola | nucleus, plastid | 24.09 | 41.8 |
| CDY19175 | Canola | nucleus, plastid | 25.2 | 41.67 |
| KRH22304 | Soybean | nucleus | 41.42 | 41.09 |
| KRH27020 | Soybean | nucleus | 41.73 | 41.02 |
| Solyc10g008070.2.1 | Tomato | nucleus | 23.31 | 40.88 |
| CDY26215 | Canola | mitochondrion | 26.14 | 40.1 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 41.1 | 39.91 |
| Bra025948.1-P | Field mustard | mitochondrion | 25.98 | 39.86 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 21.73 | 38.87 |
| CDY48040 | Canola | nucleus, plastid | 23.78 | 38.52 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 23.78 | 38.52 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 18.58 | 37.94 |
| CDX82101 | Canola | nucleus | 10.87 | 37.7 |
| CDX82103 | Canola | plastid | 18.58 | 37.7 |
| TraesCS3D01G235000.1 | Wheat | cytosol, nucleus, plastid | 12.76 | 37.5 |
| CDY06203 | Canola | nucleus | 37.64 | 37.11 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 25.67 | 37.05 |
| CDY21732 | Canola | cytosol | 14.8 | 37.01 |
| AT1G73150.1 | Thale cress | plastid | 26.77 | 36.88 |
| TraesCS3D01G234900.1 | Wheat | cytosol, nucleus, plastid | 12.76 | 36.49 |
| CDY09981 | Canola | nucleus | 36.22 | 35.99 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 27.24 | 35.52 |
| Solyc12g014170.1.1 | Tomato | nucleus | 39.21 | 35.52 |
| Bra032431.1-P | Field mustard | nucleus | 36.69 | 35.46 |
| PGSC0003DMT400039787 | Potato | nucleus | 38.74 | 34.94 |
| PGSC0003DMT400032373 | Potato | nucleus | 40.47 | 34.68 |
| CDX86532 | Canola | nucleus | 37.01 | 33.33 |
| Solyc07g062660.2.1 | Tomato | nucleus | 38.58 | 32.58 |
| Bra015485.1-P | Field mustard | nucleus | 38.43 | 32.58 |
| Bra030643.1-P | Field mustard | nucleus | 37.64 | 32.34 |
| AT1G06230.2 | Thale cress | nucleus | 37.17 | 30.81 |
| KRH25703 | Soybean | nucleus | 41.57 | 30.21 |
| TraesCS2D01G466700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.2 | 30.0 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 12.28 | 28.36 |
| CDY72432 | Canola | cytosol | 21.57 | 27.13 |
| KRH55813 | Soybean | nucleus | 41.57 | 26.8 |
| CDY68605 | Canola | cytosol | 22.68 | 26.23 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 13.54 | 24.5 |
| TraesCS1D01G373000.1 | Wheat | cytosol | 13.23 | 23.4 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 19.06 | 17.21 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 19.84 | 16.8 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 18.74 | 16.62 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 18.58 | 16.55 |
| TraesCS7D01G526000.1 | Wheat | nucleus, plastid | 14.02 | 16.48 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 |
| InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 |
| PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 |
| SUPFAM:SSF47370 | EnsemblPlantsGene:TraesCS6D01G177700 | EnsemblPlants:TraesCS6D01G177700.1 | TIGR:cd05506 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:+:179946488..179949169
Molecular Weight (calculated)
68812.1 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.798
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRWAPEIKV YSRRNPRKNP KPPPEGPTPD PNPPPEPSPD PNPHPEPCXX XXXXXXXXXX ASFRRSIRRS EAEDAVPPLS DPAAPTSPPP LSPTSSPHGA
101: PAAASGDFSS GLARDGAAVP NGHADIDIRA AADDKARKRR VRSELRRQLA SELDQVRVLS KRLKAAGEAL AVEASQPVPR PPPLLTAGYV QPQFSGSDAV
201: TPVPAPVTAS VPPVRSFLPR RPLIVPEVHT ESLDKEKRTP KANQLYQNSE FLLAKDRIPP SDSHGRKKTK HHKKKHRSSS AHGAGYNAEQ RLYSHAFKKS
301: SSLLSRLMKH KFGWVFNKPV DPVALGLHDY FAIIKHPMDL GTIKGQLTRG HYRDPKEFAN DVRLTFHNAM TYNPKGQDVH FMAEQLLGIF EAQWPEIEAE
401: VDYLASCPPL PKKFPPPPID LRLLERSDSL KHHMALDSKS RPINHTPISV RTPSLKKPKA KDLDKRDMTI DEKRKLSNNL QNLPPEKLDI VVQIIKNKNL
501: SVRQHEDEIE VEIDSMDAET LWELDRFVAN FKKNLSKQKR KAERAMLARQ DVELRALHAA QQTSQQPNIG EKSPKLNLMV GEQLATSVPD QNNNNIPSAS
601: RSSSSSSSSS DSDSSSSDSD SDSSSTDGSN AANSS
101: PAAASGDFSS GLARDGAAVP NGHADIDIRA AADDKARKRR VRSELRRQLA SELDQVRVLS KRLKAAGEAL AVEASQPVPR PPPLLTAGYV QPQFSGSDAV
201: TPVPAPVTAS VPPVRSFLPR RPLIVPEVHT ESLDKEKRTP KANQLYQNSE FLLAKDRIPP SDSHGRKKTK HHKKKHRSSS AHGAGYNAEQ RLYSHAFKKS
301: SSLLSRLMKH KFGWVFNKPV DPVALGLHDY FAIIKHPMDL GTIKGQLTRG HYRDPKEFAN DVRLTFHNAM TYNPKGQDVH FMAEQLLGIF EAQWPEIEAE
401: VDYLASCPPL PKKFPPPPID LRLLERSDSL KHHMALDSKS RPINHTPISV RTPSLKKPKA KDLDKRDMTI DEKRKLSNNL QNLPPEKLDI VVQIIKNKNL
501: SVRQHEDEIE VEIDSMDAET LWELDRFVAN FKKNLSKQKR KAERAMLARQ DVELRALHAA QQTSQQPNIG EKSPKLNLMV GEQLATSVPD QNNNNIPSAS
601: RSSSSSSSSS DSDSSSSDSD SDSSSTDGSN AANSS
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.