Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66497 | Canola | nucleus | 22.08 | 45.16 |
| CDX86532 | Canola | nucleus | 99.05 | 44.54 |
| CDY06203 | Canola | nucleus | 90.22 | 44.41 |
| CDY09981 | Canola | nucleus | 86.44 | 42.88 |
| Bra030643.1-P | Field mustard | nucleus | 99.68 | 42.76 |
| CDX82101 | Canola | nucleus | 22.71 | 39.34 |
| CDY26219 | Canola | nucleus | 22.71 | 38.71 |
| CDY08771 | Canola | nucleus | 43.22 | 38.7 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 19.87 | 37.95 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 53.31 | 37.81 |
| AT1G06230.2 | Thale cress | nucleus | 88.01 | 36.42 |
| CDX96751 | Canola | nucleus, plastid | 41.96 | 36.34 |
| GSMUA_Achr11P... | Banana | nucleus | 47.95 | 35.93 |
| CDX83890 | Canola | nucleus, plastid | 41.32 | 35.79 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 57.41 | 35.41 |
| CDY26215 | Canola | mitochondrion | 45.74 | 35.02 |
| CDY19175 | Canola | nucleus, plastid | 42.27 | 34.9 |
| Zm00001d008922_P001 | Maize | plastid | 53.31 | 34.49 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 54.26 | 33.99 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 54.57 | 33.92 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 54.26 | 33.73 |
| CDY48040 | Canola | nucleus, plastid | 41.01 | 33.16 |
| CDX82103 | Canola | plastid | 31.86 | 32.27 |
| EES02258 | Sorghum | plastid | 45.11 | 32.06 |
| CDX78390 | Canola | nucleus | 23.97 | 31.8 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 51.1 | 31.58 |
| KRH27020 | Soybean | nucleus | 63.72 | 31.27 |
| CDX70356 | Canola | nucleus, plastid | 24.29 | 31.17 |
| PGSC0003DMT400027387 | Potato | nucleus | 56.47 | 31.08 |
| KRH22304 | Soybean | nucleus | 62.46 | 30.94 |
| CDY65656 | Canola | cytosol | 20.19 | 30.92 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 62.78 | 30.43 |
| CDY21732 | Canola | cytosol | 22.08 | 27.56 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 53.94 | 26.89 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 53.63 | 26.86 |
| Solyc10g008070.2.1 | Tomato | nucleus | 30.6 | 26.8 |
| Os02t0250300-01 | Rice | nucleus | 55.2 | 26.68 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 53.31 | 26.61 |
| CDY65645 | Canola | nucleus, plastid | 42.59 | 26.52 |
| Zm00001d016131_P006 | Maize | nucleus | 53.31 | 25.19 |
| OQU84709 | Sorghum | nucleus | 54.57 | 24.3 |
| KRH25703 | Soybean | nucleus | 64.35 | 23.34 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 19.24 | 22.18 |
| CDY72432 | Canola | cytosol | 33.44 | 20.99 |
| Zm00001d053427_P007 | Maize | nucleus | 44.8 | 20.79 |
| KRH55813 | Soybean | nucleus | 63.09 | 20.3 |
| CDY68605 | Canola | cytosol | 34.7 | 20.04 |
| CDX90608 | Canola | cytosol | 20.19 | 17.98 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 20.19 | 17.58 |
| CDY31648 | Canola | nucleus | 22.4 | 16.71 |
| Zm00001d039369_P004 | Maize | plastid | 49.21 | 16.65 |
| CDX84278 | Canola | nucleus | 22.4 | 16.21 |
| CDX70357 | Canola | plastid | 18.61 | 15.01 |
| CDY20057 | Canola | nucleus | 29.97 | 14.73 |
| CDX84396 | Canola | nucleus | 25.87 | 13.38 |
| CDY43984 | Canola | endoplasmic reticulum | 17.35 | 12.59 |
| CDY13699 | Canola | nucleus | 14.51 | 10.07 |
| CDX83673 | Canola | nucleus | 14.83 | 9.44 |
| CDY16729 | Canola | nucleus | 33.75 | 9.37 |
| CDY48139 | Canola | nucleus | 21.45 | 7.69 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A078FTF1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| EnsemblPlants:CDY15568 | ProteinID:CDY15568 | ProteinID:CDY15568.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00089745001 | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0004EF0DE4 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g28520DBnaA08g28520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTF1]
Coordinates
chrLK032055:+:561002..562958
Molecular Weight (calculated)
35309.2 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.830
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHKHGWVFN APVDVKGLGL HDYFAIIEHP MDLGTVKSAL ANNLYKSPRE FAEDVRLTFH NAMTYNPPGQ DVHIMAEVLL QMFEERWAVI EADYNRQLRF
101: ASGYEMNLPA STMSNTMDWS GLPSDLQHPK PTTTPGRTPT SARTPALKKP KANEPNKRDM TYEEKQKLSG QLQNLPPEKL DAIVQIVNKR NTAVKLRDEE
201: IEVDIDSVDP ETLWELDRFV TNYKKGLSKK KRRAELAIQA KAEAERNSQQ QMAPAPVAHE FSREGGNTAK KTLPTQVPSQ VEKQNNETSR SSSSSSSSSS
301: SSSSSDSDSD SSSSSGS
101: ASGYEMNLPA STMSNTMDWS GLPSDLQHPK PTTTPGRTPT SARTPALKKP KANEPNKRDM TYEEKQKLSG QLQNLPPEKL DAIVQIVNKR NTAVKLRDEE
201: IEVDIDSVDP ETLWELDRFV TNYKKGLSKK KRRAELAIQA KAEAERNSQQ QMAPAPVAHE FSREGGNTAK KTLPTQVPSQ VEKQNNETSR SSSSSSSSSS
301: SSSSSDSDSD SSSSSGS
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.