Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83890 | Canola | nucleus, plastid | 97.27 | 97.27 |
| CDY66497 | Canola | nucleus | 37.43 | 88.39 |
| CDY26219 | Canola | nucleus | 42.08 | 82.8 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 98.36 | 81.82 |
| CDY19175 | Canola | nucleus, plastid | 81.97 | 78.12 |
| CDY26215 | Canola | mitochondrion | 76.5 | 67.63 |
| CDY21732 | Canola | cytosol | 44.26 | 63.78 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 78.14 | 58.73 |
| CDX82103 | Canola | plastid | 49.45 | 57.83 |
| CDY48040 | Canola | nucleus, plastid | 60.38 | 56.38 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 39.62 | 52.73 |
| CDX82101 | Canola | nucleus | 25.68 | 51.37 |
| CDY15568 | Canola | nucleus | 36.34 | 41.96 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 46.72 | 38.26 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 16.94 | 37.35 |
| GSMUA_Achr11P... | Banana | nucleus | 41.26 | 35.7 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 50.0 | 35.6 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 28.96 | 34.08 |
| Zm00001d008922_P001 | Maize | plastid | 45.63 | 34.08 |
| CDY08771 | Canola | nucleus | 31.97 | 33.05 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 45.63 | 33.0 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 45.63 | 32.75 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 45.63 | 32.75 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 43.17 | 30.8 |
| EES02258 | Sorghum | plastid | 37.43 | 30.72 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 48.36 | 29.65 |
| CDY65645 | Canola | nucleus, plastid | 37.16 | 26.72 |
| CDY65656 | Canola | cytosol | 14.75 | 26.09 |
| CDY09981 | Canola | nucleus | 43.17 | 24.73 |
| CDY06203 | Canola | nucleus | 43.44 | 24.69 |
| Os02t0250300-01 | Rice | nucleus | 43.99 | 24.54 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 41.8 | 24.09 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 41.53 | 24.01 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 41.53 | 23.9 |
| Zm00001d016131_P006 | Maize | nucleus | 43.17 | 23.55 |
| CDX78390 | Canola | nucleus | 15.3 | 23.43 |
| OQU84709 | Sorghum | nucleus | 44.26 | 22.75 |
| CDX70356 | Canola | nucleus, plastid | 15.3 | 22.67 |
| PGSC0003DMT400039787 | Potato | nucleus | 43.17 | 22.44 |
| CDX86532 | Canola | nucleus | 43.17 | 22.41 |
| Solyc12g014170.1.1 | Tomato | nucleus | 42.9 | 22.4 |
| PGSC0003DMT400032373 | Potato | nucleus | 41.8 | 20.65 |
| CDX70357 | Canola | plastid | 21.31 | 19.85 |
| Solyc07g062660.2.1 | Tomato | nucleus | 39.89 | 19.41 |
| Zm00001d053427_P007 | Maize | nucleus | 35.79 | 19.18 |
| CDX90608 | Canola | cytosol | 18.31 | 18.82 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 18.58 | 18.68 |
| CDY31648 | Canola | nucleus | 21.04 | 18.12 |
| CDX84278 | Canola | nucleus | 21.04 | 17.58 |
| Zm00001d039369_P004 | Maize | plastid | 42.08 | 16.44 |
| CDY72432 | Canola | cytosol | 22.13 | 16.04 |
| CDY68605 | Canola | cytosol | 22.95 | 15.3 |
| CDY20057 | Canola | nucleus | 26.23 | 14.88 |
| CDY43984 | Canola | endoplasmic reticulum | 14.21 | 11.9 |
| CDX84396 | Canola | nucleus | 18.85 | 11.26 |
| CDY48139 | Canola | nucleus | 23.22 | 9.62 |
| CDY13699 | Canola | nucleus | 10.38 | 8.32 |
| CDY16729 | Canola | nucleus | 25.41 | 8.14 |
| CDX83673 | Canola | nucleus | 10.11 | 7.43 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDX96751 |
| ProteinID:CDX96751 | ProteinID:CDX96751.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00102972001 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0004EE3D47 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g22940D
Coordinates
chrLK031895:+:834635..836611
Molecular Weight (calculated)
40239.0 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.783
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDHGGGGA SKKKNHQNRS KPMAGPRPNR SVPLPSEDDD YPMLKVSLSS ISKLEVRNLK RKLTAELDEV RSLMTRFDPQ PQSKKTKQTG NKKGNAQILK
101: SCNALLTKLM KHKDGWVFNV PVDAKGLGLH DYHSIVKEPM DLGTVKAKLG GGLYESPLDF AEDVRLTFNN AILYNPVGHE VHSMAKFLLS MFEEKWVSIE
201: EAPVDVRDLT MDEKRRLSEE LQDLPYDKLE TVVQIIKKSN PELSQQDDEI ELDIDSVDVQ TLWELYRFVI GYKEGLSSKK EDQGFGSERD AESVHNSIQE
301: PTILATGTET SRANESGKAI RMSSPGRQEN NAGGSSSSNS SSSDTGSGSS DSDSDSSSGR GSDTGN
101: SCNALLTKLM KHKDGWVFNV PVDAKGLGLH DYHSIVKEPM DLGTVKAKLG GGLYESPLDF AEDVRLTFNN AILYNPVGHE VHSMAKFLLS MFEEKWVSIE
201: EAPVDVRDLT MDEKRRLSEE LQDLPYDKLE TVVQIIKKSN PELSQQDDEI ELDIDSVDVQ TLWELYRFVI GYKEGLSSKK EDQGFGSERD AESVHNSIQE
301: PTILATGTET SRANESGKAI RMSSPGRQEN NAGGSSSSNS SSSDTGSGSS DSDSDSSSGR GSDTGN
001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
Arabidopsis Description
GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.