CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035848.1-P	Field mustard	nucleus	99.65	95.55
CDX84396	Canola	nucleus	41.07	76.51
CDY48139	Canola	nucleus	58.32	75.34
AT5G63320.1	Thale cress	nucleus	48.69	52.4
CDY13699	Canola	nucleus	17.25	43.11
VIT_17s0000g01830.t01	Wine grape	nucleus	28.02	42.38
Solyc03g111090.2.1	Tomato	nucleus	27.23	39.82
KRH57199	Soybean	nucleus	25.74	39.78
CDX83673	Canola	nucleus	17.25	39.56
KRH54219	Soybean	nucleus	26.88	38.96
KRH63729	Soybean	nucleus	26.71	38.95
PGSC0003DMT400039290	Potato	nucleus	26.8	38.93
GSMUA_Achr8P01140_001	Banana	nucleus	24.61	37.42
TraesCS3A01G087800.1	Wheat	plastid	19.79	37.05
CDY20057	Canola	nucleus	20.49	36.28
GSMUA_Achr8P08920_001	Banana	nucleus	20.58	36.15
KXG24325	Sorghum	nucleus	22.15	35.73
GSMUA_Achr10P...	Banana	nucleus	19.7	35.27
CDY15568	Canola	nucleus	9.37	33.75
GSMUA_Achr2P20970_001	Banana	nucleus	21.02	33.33
TraesCS7D01G309100.1	Wheat	nucleus	21.8	33.2
Zm00001d035167_P001	Maize	nucleus	21.98	33.11
TraesCS6A01G214000.1	Wheat	nucleus	20.4	33.0
TraesCS7A01G312700.2	Wheat	nucleus	21.63	32.93
TraesCS6D01G196600.3	Wheat	nucleus	20.23	32.86
TraesCS7B01G212400.2	Wheat	nucleus	21.54	32.8
Os02t0601800-03	Rice	nucleus	20.32	32.49
TraesCS6B01G244000.2	Wheat	plastid	20.23	32.08
HORVU6Hr1G054560.16	Barley	nucleus	19.96	31.89
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	21.72	31.84
TraesCS3D01G087900.4	Wheat	nucleus	19.79	31.56
TraesCS3B01G103200.2	Wheat	nucleus	19.61	31.33
Zm00001d049638_P009	Maize	nucleus	20.93	30.76
TraesCS3B01G141400.2	Wheat	nucleus, plastid	19.18	30.72
TraesCS3D01G124100.1	Wheat	nucleus	19.09	30.57
TraesCS3A01G122200.1	Wheat	nucleus	19.0	30.43
EES07108	Sorghum	nucleus	18.91	30.38
Zm00001d017126_P001	Maize	nucleus	18.39	30.17
HORVU3Hr1G022660.1	Barley	nucleus	18.74	30.06
CDY08771	Canola	nucleus	9.28	29.94
GSMUA_Achr3P02660_001	Banana	plasma membrane	16.64	29.05
CDY66497	Canola	nucleus	3.94	29.03
GSMUA_Achr3P02670_001	Banana	nucleus	17.25	27.94
HORVU3Hr1G015760.1	Barley	nucleus	12.96	26.81
CDY43984	Canola	endoplasmic reticulum	10.25	26.77
CDX78390	Canola	nucleus	5.52	26.36
CDX82101	Canola	nucleus	4.2	26.23
CDX70356	Canola	nucleus, plastid	5.6	25.91
CDX83890	Canola	nucleus, plastid	8.23	25.68
CDX96751	Canola	nucleus, plastid	8.14	25.41
CDY26215	Canola	mitochondrion	8.93	24.64
CDY19175	Canola	nucleus, plastid	8.14	24.22
CDY26219	Canola	nucleus	3.94	24.19
CDY48040	Canola	nucleus, plastid	8.06	23.47
CDY65656	Canola	cytosol	4.12	22.71
CDX82103	Canola	plastid	6.13	22.36
CDY65645	Canola	nucleus, plastid	9.54	21.41
CDY21732	Canola	cytosol	4.03	18.11
CDY06203	Canola	nucleus	10.16	18.01
CDY09981	Canola	nucleus	9.81	17.53
CDY31648	Canola	nucleus	5.95	16.0
CDX86532	Canola	nucleus	9.72	15.74
CDX90608	Canola	cytosol	4.9	15.73
CDX84278	Canola	nucleus	5.95	15.53
CDY29075	Canola	cytoskeleton, cytosol, nucleus	4.82	15.11
CDX70357	Canola	plastid	4.03	11.7
CDY72432	Canola	cytosol	5.17	11.68
CDY68605	Canola	cytosol	5.25	10.93
CDX81848	Canola	cytosol, nucleus, plastid	2.63	10.91

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54
Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078FUM0	UniProt:A0A078FUM0	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
EnsemblPlants:CDY16729	ProteinID:CDY16729	ProteinID:CDY16729.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004550	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183
GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00094596001	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353
InterPro:IPR036427	InterPro:IPR036850	InterPro:IPR038336	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf
InterPro:NET_dom	InterPro:NET_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PFAM:PF00439
PFAM:PF17035	PRINTS:PR00503	PRINTS:PR01243	ScanProsite:PS00469	PFscan:PS50014	PFscan:PS51525
PANTHER:PTHR22880	PANTHER:PTHR22880:SF228	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187
MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221
MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00297	SMART:SM00562
SUPFAM:SSF47370	SUPFAM:SSF54919	UniParc:UPI0004EE581A	SEG:seg	:	:

Description

BnaA09g06530DBnaA09g06530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUM0]

Coordinates

chrLK032067:+:59936..66067

Molecular Weight (calculated)

128539.0 Da

IEP (calculated)

4.228

GRAVY (calculated)

-0.827

Length

1142 amino acids

Sequence
(BLAST)

0001: MKECQTLVDR LWSHKLGFPF RIPVDPVLLN IPDYFTVIKH PMDLGTIRSR LRNGEYSSPL DFAADVRLTF SNSMAYNPPG NQYHKMARDL SAYFESRWKT
0101: IEKKIPVMEP PVTYLTSSAS LESEVPYNVP PPRKNTASVN ESKLRVEPPK LVMTDDEKKK LSQDLDALEE FPQNIVDLLK EQIGNDDLSG EVEIEIDIET
0201: LSDETLFMVR KLLDDYLKDR KKSQEKSEHC EMEIAHDSGF SNSTLQPSKG DLLIDEDVDI IGGNDPPVSS HPPHKIEKDD ACRNNECSSS SSSSRESGSS
0301: SSDSDSCSSS RSETDFTKAS NPTSTEDKQE PGVDINGEKI VVNDSLNESC QVEHDVREKS TSMAALNVLT EEETAPLERQ DSPGKRQRAA LLKNRFADTI
0401: MKAREKTLTK GEKGDPEKLR IEREKFEKRL REENLRLQAE AKAVEEARRK AKAEAAEKAR REREQEREAA RQALQKLEKT VEIDEGRRFM EDLEMLRATG
0501: AEGDQLPTFM EEMSPKCSPD MLGSFKMEGN SNPLEQLGLY MKMDEDEDDE EDEPHFRQGE VDEQTLDRKE RFTLSPHGVE REDQLDNGNK KPASQKAQDN
0601: GNQEDEKFIN QKEGEEQIEN GPVKQEIGVE DKGDEEAGIV DMVGVETEVV EMVKVDTEEV DTREQETEVV GNGEKETEVG GMGEQDNGIE DKGDEEAEMY
0701: NKDEEAGIVD MEGKETEVVD MVKVETEVVD MREQETEVVD MVKVENEIGG MGEQDNGIEY KGDEEVEVVD NKDEEAGIVD MGEEETEGVD MVKEVETEGV
0801: DMREQEETEA VDNVEKETEV VVMGKKENEI GGIREEETEV VHKREEETEV VENGEEETEV VDMGDEETEV VQTREEEEVV GKGQEGNRVI NDSLSQYFWI
0901: DPEVSETVRE AEGNKMAVVG QWTLCVASPR LTPAICSSTS SPTTVNLRAE LAAFRPQFRL FSRTSPSRRR LRASTSSAES GIFLPHLVAS MEQVEETYIM
1001: VKPDGIQRGL VGEIISRFEK KGFKLIGLKM FQCPRELAEE HYKDLSSKSF FSSLIEYITS GPVVCMAWEG VGVVASARKM IGKTDPLQAE PGTIRGDLAV
1101: QTGRNIVHGS DSPENGKREI ALWFKEGELC EWDSVLAKWL RE

Best Arabidopsis Sequence Match ( AT5G63320.1 )
(BLAST)

0001: MGKARKHSRG RPSGFVPDYM QAVEPDEFVY SERMNSEASP PLKRRRFGLN GDNNGVSKEV LSLSKMSRSE RKNLVHKLKM ELQQVRDLSK KIASFSSDTV
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D

Arabidopsis Description

GTE10NPX1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIE5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.