Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P20970_001 | Banana | nucleus | 64.58 | 57.22 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 54.39 | 53.38 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 55.49 | 47.14 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 45.45 | 44.34 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 52.35 | 44.24 |
| KRH54219 | Soybean | nucleus | 52.98 | 42.89 |
| KRH63729 | Soybean | nucleus | 52.19 | 42.53 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 46.87 | 42.41 |
| Bra038624.1-P | Field mustard | nucleus | 15.83 | 41.74 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 47.96 | 41.52 |
| Solyc03g111090.2.1 | Tomato | nucleus | 50.31 | 41.1 |
| Bra025262.1-P | Field mustard | nucleus | 34.8 | 41.04 |
| PGSC0003DMT400039290 | Potato | nucleus | 50.16 | 40.71 |
| KRH57199 | Soybean | nucleus | 46.55 | 40.19 |
| KRH07021 | Soybean | nucleus | 45.77 | 39.25 |
| KRG94435 | Soybean | nucleus | 45.14 | 38.81 |
| CDY20057 | Canola | nucleus | 39.19 | 38.76 |
| Bra039088.1-P | Field mustard | nucleus | 39.03 | 38.25 |
| AT3G01770.1 | Thale cress | nucleus | 36.68 | 37.74 |
| PGSC0003DMT400052108 | Potato | nucleus | 42.01 | 36.76 |
| Solyc02g093880.2.1 | Tomato | nucleus | 41.69 | 36.69 |
| AT5G14270.2 | Thale cress | nucleus | 39.5 | 36.57 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 40.28 | 36.56 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 40.28 | 36.4 |
| TraesCS3A01G087800.1 | Wheat | plastid | 34.8 | 36.39 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 40.28 | 35.94 |
| Zm00001d035167_P001 | Maize | nucleus | 42.48 | 35.75 |
| TraesCS6B01G244000.2 | Wheat | plastid | 40.13 | 35.56 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 39.81 | 35.47 |
| Os02t0601800-03 | Rice | nucleus | 39.66 | 35.43 |
| KRH07022 | Soybean | nucleus | 43.57 | 35.37 |
| Zm00001d017126_P001 | Maize | nucleus | 38.4 | 35.2 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 41.38 | 35.2 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 41.22 | 35.07 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 39.19 | 34.97 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 41.07 | 34.93 |
| CDY13699 | Canola | nucleus | 24.92 | 34.79 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 38.87 | 34.78 |
| EES07108 | Sorghum | nucleus | 38.71 | 34.74 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 29.78 | 34.42 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 38.4 | 34.36 |
| KXG24325 | Sorghum | nucleus | 38.09 | 34.32 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 37.77 | 33.8 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 37.62 | 33.71 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 41.07 | 33.63 |
| Zm00001d049638_P009 | Maize | nucleus | 39.97 | 32.82 |
| CDX84396 | Canola | nucleus | 31.35 | 32.63 |
| CDX83673 | Canola | nucleus | 25.39 | 32.53 |
| AT3G27260.3 | Thale cress | nucleus | 40.6 | 31.51 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 19.44 | 27.74 |
| GSMUA_Achr1P15650_001 | Banana | nucleus | 19.91 | 25.81 |
| GSMUA_Achr11P... | Banana | nucleus | 16.77 | 25.3 |
| AT5G63320.1 | Thale cress | nucleus | 42.01 | 25.26 |
| GSMUA_Achr3P00480_001 | Banana | nucleus | 19.59 | 23.95 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 18.97 | 23.59 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 18.97 | 23.54 |
| CDY48139 | Canola | nucleus | 32.6 | 23.53 |
| GSMUA_Achr4P27780_001 | Banana | nucleus | 22.88 | 21.66 |
| CDY16729 | Canola | nucleus | 35.27 | 19.7 |
| Bra035848.1-P | Field mustard | nucleus | 35.27 | 18.89 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 11.29 | 18.41 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 9.4 | 13.95 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSMUA_Achr10G16600_001 | EnsemblPlants:GSMUA_Achr10P16600_001 | EnsemblPlants:GSMUA_Achr10T16600_001 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 |
| InterPro:IPR036427 | InterPro:IPR038336 | UniProt:M0RIT5 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 |
| PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 |
| SMART:SM00297 | SUPFAM:SSF47370 | TMHMM:TMhelix | UniParc:UPI000294F00E | SEG:seg | : |
Description
Putative Bromodomain-containing protein GTE3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G16600_001]
Coordinates
chr10:+:24072225..24080831
Molecular Weight (calculated)
71536.6 Da
IEP (calculated)
6.825
GRAVY (calculated)
-0.696
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTVLLEYT NQKQMKKSSQ DLSFAMGKLQ KLCSGSVVDY QHGLEVMLES ECFASSTHAD SKDSTSPKRK RCITLNVGRC NSFNVPLQVI CLSKMSGFQK
101: KELKTKLKSE LEQTQVFQEK LNLRSVLNVG SSKTAEHPVS ANNSNLVLMK QCQTLLKLLM SHQYGWVFNK PVDPKKLNIP DYYTVIKQPM DLGTIKKKIT
201: SGAYSSPWGF VADIRLTFTN AMTYNPPGND VHIMADTVSK FFETRWKPIE KELASADAHV KRETQAPKSV SSSKKRKMPL NDSNTPAPES IIPKMTDEDK
301: QSLTRRLESL LADLPDYIID FLRRNSGNMN QSCEEIEIDI ETLGEDTLFE LQKLLDNYLQ ERETRQVKVK QCKGEVNENG VHTSAMYSCK GNDFADEDVD
401: ICGDDPPMSC YPTLAIEKDA KARNIKCSSS SSSSSDSGST GDSDSSTGSE PEEQVSVPKD AAKENSGTKA SSDQEKSDVM NPLDFNRTWS GLSQSEKDAH
501: PRSLLVEADE CQEGEHAPSE RQVSPQKLYR AALLRSRFAD TILKAREKTL HQGDKGDPEK LRREREEIER QQREERARLQ AEAKAAEDAR RQAEAEAAAE
601: AKRKRELERE AARQALLKAS ISFCLLIFFC CSVPLYIL
101: KELKTKLKSE LEQTQVFQEK LNLRSVLNVG SSKTAEHPVS ANNSNLVLMK QCQTLLKLLM SHQYGWVFNK PVDPKKLNIP DYYTVIKQPM DLGTIKKKIT
201: SGAYSSPWGF VADIRLTFTN AMTYNPPGND VHIMADTVSK FFETRWKPIE KELASADAHV KRETQAPKSV SSSKKRKMPL NDSNTPAPES IIPKMTDEDK
301: QSLTRRLESL LADLPDYIID FLRRNSGNMN QSCEEIEIDI ETLGEDTLFE LQKLLDNYLQ ERETRQVKVK QCKGEVNENG VHTSAMYSCK GNDFADEDVD
401: ICGDDPPMSC YPTLAIEKDA KARNIKCSSS SSSSSDSGST GDSDSSTGSE PEEQVSVPKD AAKENSGTKA SSDQEKSDVM NPLDFNRTWS GLSQSEKDAH
501: PRSLLVEADE CQEGEHAPSE RQVSPQKLYR AALLRSRFAD TILKAREKTL HQGDKGDPEK LRREREEIER QQREERARLQ AEAKAAEDAR RQAEAEAAAE
601: AKRKRELERE AARQALLKAS ISFCLLIFFC CSVPLYIL
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.