Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d017101_P001 | |
| Zm00001d025707_P001 | |
| Zm00001d042443_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24325 | Sorghum | nucleus | 74.9 | 82.2 |
| Zm00001d035167_P001 | Maize | nucleus | 79.79 | 81.79 |
| Zm00001d021185_P001 | Maize | cytosol, nucleus, plastid | 7.59 | 75.64 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 59.07 | 61.2 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 58.82 | 60.93 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 58.69 | 60.8 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 58.82 | 58.66 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 43.63 | 45.14 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 42.6 | 43.84 |
| Bra025262.1-P | Field mustard | nucleus | 30.5 | 43.81 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 36.29 | 43.38 |
| KRH57199 | Soybean | nucleus | 40.15 | 42.22 |
| KRH63729 | Soybean | nucleus | 42.47 | 42.15 |
| KRH54219 | Soybean | nucleus | 42.08 | 41.5 |
| CDY20057 | Canola | nucleus | 33.33 | 40.16 |
| CDY13699 | Canola | nucleus | 23.55 | 40.04 |
| GSMUA_Achr10P... | Banana | nucleus | 32.82 | 39.97 |
| KRH07021 | Soybean | nucleus | 38.1 | 39.78 |
| Solyc03g111090.2.1 | Tomato | nucleus | 39.9 | 39.69 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 37.58 | 39.62 |
| Bra039088.1-P | Field mustard | nucleus | 33.08 | 39.48 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 36.42 | 39.31 |
| PGSC0003DMT400039290 | Potato | nucleus | 39.64 | 39.19 |
| Bra038624.1-P | Field mustard | nucleus | 12.1 | 38.84 |
| KRG94435 | Soybean | nucleus | 36.81 | 38.54 |
| Solyc02g093880.2.1 | Tomato | nucleus | 35.01 | 37.52 |
| PGSC0003DMT400052108 | Potato | nucleus | 34.75 | 37.04 |
| AT5G14270.2 | Thale cress | nucleus | 32.82 | 37.01 |
| CDX83673 | Canola | nucleus | 23.42 | 36.55 |
| AT3G01770.1 | Thale cress | nucleus | 29.09 | 36.45 |
| KRH07022 | Soybean | nucleus | 36.68 | 36.26 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 30.12 | 35.78 |
| Zm00001d017126_P001 | Maize | nucleus | 31.53 | 35.2 |
| CDX84396 | Canola | nucleus | 27.41 | 34.75 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 30.24 | 33.33 |
| AT3G27260.3 | Thale cress | nucleus | 34.36 | 32.48 |
| Zm00001d004790_P008 | Maize | nucleus | 19.56 | 26.3 |
| AT5G63320.1 | Thale cress | nucleus | 35.78 | 26.2 |
| CDY48139 | Canola | nucleus | 29.21 | 25.68 |
| Zm00001d008922_P001 | Maize | plastid | 16.09 | 25.51 |
| Zm00001d053022_P001 | Maize | nucleus | 19.43 | 24.63 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 10.94 | 23.29 |
| Zm00001d002267_P001 | Maize | plastid | 13.51 | 23.28 |
| Zm00001d026333_P001 | Maize | cytosol | 13.38 | 22.08 |
| Zm00001d049400_P001 | Maize | plastid | 13.26 | 21.28 |
| CDY16729 | Canola | nucleus | 30.76 | 20.93 |
| Zm00001d024251_P001 | Maize | cytosol | 12.87 | 20.53 |
| Bra035848.1-P | Field mustard | nucleus | 30.63 | 19.98 |
| Zm00001d046528_P001 | Maize | cytosol | 3.73 | 19.33 |
| Zm00001d016131_P006 | Maize | nucleus | 16.34 | 18.93 |
| Zm00001d053427_P007 | Maize | nucleus | 13.51 | 15.37 |
| Zm00001d039369_P004 | Maize | plastid | 16.86 | 13.98 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:103653114 | MapMan:15.5.54 | UniProt:A0A1D6PWP4 | ProteinID:AQK50963.1 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 |
| PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI00084418C3 | EnsemblPlantsGene:Zm00001d049638 |
| EnsemblPlants:Zm00001d049638_P009 | EnsemblPlants:Zm00001d049638_T009 | SEG:seg | : | : | : |
Description
Transcription factor GTE8
Coordinates
chr4:+:38430862..38437862
Molecular Weight (calculated)
86225.8 Da
IEP (calculated)
5.572
GRAVY (calculated)
-0.704
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKTHMFSK GHPLGFVPDY RHRVEAMGEF KRLGSPVRVD SGSYCPPPKR KCVSVNSEER ECASGFSLTR VPREVFSLPS MTALDKKDVE MRLHHELAQV
101: KDLQIRLFSG GHNVGSMNGA TVASAPGSDM LPKKKAEKLR RSNSVQTDRG APPPMATAVA PPVSSSINYT SSFKQCANLL KSLMSHVWAS PFLVPVDIVK
201: LNIPDYFQIV KQPMDLGTIQ KRMKAGMYST PPEFAADVRL TFSNAMNYNP ANNDVHLMAK TLSKNFESRW KLIEKKLPKP DEKPPQPDEK PPQPVEKPPV
301: RKPTKKNSTK RVSIEKEDLT KKKPSKKSVP KQYIFRGEDS ADSPVLQPKK RKTSPLVQDA PLVGDIVPTR KRIMTSEQKY DLSARLQSYG AFIPDHVVEL
401: IRSHADYCDA NEEELELDMD ALGDDTLFEL LRLLDDYDRV NPSRNLTEQD PHEVKSRSQY ELINASVCNE EVNELFDEDV DIGENDPPVL TFPPLVLEDE
501: TADRSRKHSA SSSSSSDSES SSSGSGSSSS SGSDTDAKAA QQNSVSKEKI LPVDGLGHEK DSLDTLNLPE QSTDPVSVSA YGEGLYMKIL GGYVSEKVSP
601: EKQIRAALLR SRFADTILKA REKALDQTTK KDPEKLRRER EELERLQRQE RARLQAEAKA AEDACKRAEE AAAAEAAAEA KRQRDIEREA ARKALQEMER
701: TVDINGGSHF LKDLEMLRGI TCEEMPNLVG EGSPGFQLGS SNALAKLGLY MKDDEDDEEG DLADAPVVVD IEEGEID
101: KDLQIRLFSG GHNVGSMNGA TVASAPGSDM LPKKKAEKLR RSNSVQTDRG APPPMATAVA PPVSSSINYT SSFKQCANLL KSLMSHVWAS PFLVPVDIVK
201: LNIPDYFQIV KQPMDLGTIQ KRMKAGMYST PPEFAADVRL TFSNAMNYNP ANNDVHLMAK TLSKNFESRW KLIEKKLPKP DEKPPQPDEK PPQPVEKPPV
301: RKPTKKNSTK RVSIEKEDLT KKKPSKKSVP KQYIFRGEDS ADSPVLQPKK RKTSPLVQDA PLVGDIVPTR KRIMTSEQKY DLSARLQSYG AFIPDHVVEL
401: IRSHADYCDA NEEELELDMD ALGDDTLFEL LRLLDDYDRV NPSRNLTEQD PHEVKSRSQY ELINASVCNE EVNELFDEDV DIGENDPPVL TFPPLVLEDE
501: TADRSRKHSA SSSSSSDSES SSSGSGSSSS SGSDTDAKAA QQNSVSKEKI LPVDGLGHEK DSLDTLNLPE QSTDPVSVSA YGEGLYMKIL GGYVSEKVSP
601: EKQIRAALLR SRFADTILKA REKALDQTTK KDPEKLRRER EELERLQRQE RARLQAEAKA AEDACKRAEE AAAAEAAAEA KRQRDIEREA ARKALQEMER
701: TVDINGGSHF LKDLEMLRGI TCEEMPNLVG EGSPGFQLGS SNALAKLGLY MKDDEDDEEG DLADAPVVVD IEEGEID
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.