Factsheet for HORVU7Hr1G074620.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G083410.1
HORVU2Hr1G083430.3
HORVU2Hr1G083490.1
HORVU3Hr1G092090.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01770.1	HORVU2Hr1G083410.1	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083430.3	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083490.1	AT3G48360.1	15316289
AT3G01770.1	HORVU3Hr1G092090.3	AT3G48360.1	15316289
AT3G01770.1	HORVU2Hr1G083410.1	AT5G63160.1	15316289
AT3G01770.1	HORVU2Hr1G083430.3	AT5G63160.1	15316289
AT3G01770.1	HORVU2Hr1G083490.1	AT5G63160.1	15316289
AT3G01770.1	HORVU3Hr1G092090.3	AT5G63160.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G309100.1	Wheat	nucleus	92.55	96.13
TraesCS7A01G312700.2	Wheat	nucleus	92.17	95.73
TraesCS7B01G212400.2	Wheat	nucleus	92.04	95.6
KXG24325	Sorghum	nucleus	56.23	61.86
Zm00001d035167_P001	Maize	nucleus	59.69	61.35
Zm00001d049638_P009	Maize	nucleus	58.66	58.82
GSMUA_Achr8P01140_001	Banana	nucleus	46.98	48.73
GSMUA_Achr8P08920_001	Banana	nucleus	37.74	45.23
VIT_17s0000g01830.t01	Wine grape	nucleus	43.65	45.03
Bra025262.1-P	Field mustard	nucleus	30.81	44.36
KRH57199	Soybean	nucleus	41.72	43.98
KRH63729	Soybean	nucleus	43.26	43.04
KRH54219	Soybean	nucleus	43.13	42.64
VIT_14s0171g00380.t01	Wine grape	nucleus	40.18	42.47
Solyc03g111090.2.1	Tomato	nucleus	41.59	41.49
CDY13699	Canola	nucleus	24.13	41.14
GSMUA_Achr10P...	Banana	nucleus	33.63	41.07
PGSC0003DMT400039290	Potato	nucleus	41.34	40.97
KRH07021	Soybean	nucleus	39.02	40.86
GSMUA_Achr2P20970_001	Banana	nucleus	37.74	40.83
Solyc02g093880.2.1	Tomato	nucleus	37.74	40.55
KRG94435	Soybean	nucleus	38.51	40.43
Bra039088.1-P	Field mustard	nucleus	33.76	40.4
CDY20057	Canola	nucleus	33.38	40.31
PGSC0003DMT400052108	Potato	nucleus	37.48	40.05
AT3G01770.1	Thale cress	nucleus	31.45	39.52
Bra038624.1-P	Field mustard	nucleus	12.2	39.26
AT5G14270.2	Thale cress	nucleus	34.66	39.19
KRH07022	Soybean	nucleus	39.15	38.8
HORVU6Hr1G054560.16	Barley	nucleus	34.66	37.76
CDX83673	Canola	nucleus	24.01	37.55
HORVU3Hr1G022660.1	Barley	nucleus	33.12	36.24
CDX84396	Canola	nucleus	28.5	36.22
GSMUA_Achr3P02660_001	Banana	plasma membrane	29.14	34.71
HORVU3Hr1G015760.1	Barley	nucleus	23.49	33.15
AT3G27260.3	Thale cress	nucleus	34.4	32.6
GSMUA_Achr3P02670_001	Banana	nucleus	29.27	32.34
AT5G63320.1	Thale cress	nucleus	37.23	27.33
CDY48139	Canola	nucleus	30.04	26.47
HORVU4Hr1G055510.6	Barley	cytosol, nucleus, plastid	6.68	22.81
HORVU7Hr1G118300.1	Barley	cytosol	19.9	21.77
CDY16729	Canola	nucleus	31.84	21.72
Bra035848.1-P	Field mustard	nucleus	31.84	20.82
HORVU6Hr1G045030.1	Barley	nucleus	16.43	20.22
HORVU6Hr1G045070.4	Barley	nucleus	16.43	20.13
HORVU5Hr1G097840.6	Barley	cytosol	8.73	19.43
HORVU7Hr1G018300.6	Barley	cytosol	8.6	19.03

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	UniProt:A0A287WWX2	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU7Hr1G074620	EnsemblPlants:HORVU7Hr1G074620.7
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF228	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI000B46DEB0	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:427231025..427237775

Molecular Weight (calculated)

86382.4 Da

IEP (calculated)

4.858

GRAVY (calculated)

-0.672

Length

779 amino acids

Sequence
(BLAST)

001: RLCVVVVVGA APSARRRIAL ASRLVCVFRH TMMGKTQKFS KGHPLGFVPD YRYGVETVGV SKGLGNPVRS EAKRKCLNLN TDEGADAPGF NVPRVVFELP
101: RMSASDRNEL EMRLRDELEQ VRALQSRLFS RGATTSMNGG AASAPRGDFN GNKKDGKLRR SNSVQSGRGL PPSIAQPVVS SINYTAWFKK CQELLKNLMK
201: HRSASPFVTP VDPVKLCIPD YFDIVKHPMD LGTIQKKLNA GVYPTPWEFA ADVRLTFSNA ILYNPVGNAV NIMAQTMSSV FEPRWKPIEK KLPRPDEEPS
301: AIERPKNDAV EKNIIENKEP TDRRPSNKGT YKKNTFQKEE VVAKPVLHPK KRKASPLVQD PPVASVVQMA QVAEEVPVVE TAVGMMTDEQ KVALSVRLQS
401: YGGFIPEHVV EFIKRHVNDD NDADEDELTI DMNALSDDTL FELEKLLDDY DRVNQSGNPT KDEPHEVEFQ SEYGLANSSM HHEGHELVEE DIDIGGNDLP
501: PLTYPPVVFE SEMADRSSKH SSSSSSSSES GSSSSGSDSS SSSGSDLGAK VPPANIGAKE NILPVFSLDQ ETDSQDTLQE QCAERVPISA DDEEENVSDK
601: KYRAALLKSR FADTILKARE KALDQVKDPE KVRREREELE RLQREERARL QAEAKAAEEA RKRAEAAAVA EAAAEAKRQR EREREAARKA LQQMEKTVEI
701: NEGNLFLKDF EMLGTVTGEQ NLNLVGEMSP SHTPEPLGFQ LGGNPLEQLG LYMKNDDEED EEVESADEPT VDVEEGEID

Best Arabidopsis Sequence Match ( AT5G14270.1 )
(BLAST)

001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID

Arabidopsis Description

BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.