Factsheet for HORVU2Hr1G083410.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G015760.1
HORVU3Hr1G022660.1
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3
HORVU6Hr1G054560.16
HORVU6Hr1G075720.2
HORVU7Hr1G074620.7

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	HORVU6Hr1G075720.2	AT1G26830.1	15772280
AT3G48360.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT3G48360.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088
AT3G48360.1	HORVU3Hr1G015760.1	AT3G01770.1	15316289
AT3G48360.1	HORVU3Hr1G022660.1	AT3G01770.1	15316289
AT3G48360.1	HORVU6Hr1G054560.16	AT3G01770.1	15316289
AT3G48360.1	HORVU7Hr1G074620.7	AT3G01770.1	15316289
AT3G48360.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT3G48360.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT5G63160.1	HORVU6Hr1G075720.2	AT1G26830.1	15772280
AT5G63160.1	HORVU3Hr1G015760.1	AT3G01770.1	15316289
AT5G63160.1	HORVU3Hr1G022660.1	AT3G01770.1	15316289
AT5G63160.1	HORVU6Hr1G054560.16	AT3G01770.1	15316289
AT5G63160.1	HORVU7Hr1G074620.7	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G359400.1	Wheat	cytosol	92.5	21.39
TraesCS2A01G323200.1	Wheat	cytosol	90.0	20.81
TraesCS2D01G339700.1	Wheat	cytosol	92.5	19.53
Zm00001d025707_P001	Maize	cytosol	68.75	16.13
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	71.25	15.75
Os04t0482300-01	Rice	cytosol	65.0	14.65
KRH57174	Soybean	cytosol	38.75	14.03
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	52.5	11.9
GSMUA_Achr6P12110_001	Banana	nucleus	48.75	11.27
PGSC0003DMT400069397	Potato	nucleus	45.0	10.81
GSMUA_Achr9P02050_001	Banana	cytosol	45.0	10.56
Solyc06g071820.2.1	Tomato	nucleus	43.75	10.03
PGSC0003DMT400039384	Potato	nucleus	42.5	9.86
VIT_17s0000g09790.t01	Wine grape	cytosol	42.5	9.8
AT3G48360.1	Thale cress	nucleus	43.75	9.62
Solyc03g111710.2.1	Tomato	nucleus	41.25	9.57
CDY41504	Canola	nucleus	37.5	9.04
KRH03892	Soybean	cytosol	38.75	8.96
PGSC0003DMT400069392	Potato	nucleus	38.75	8.88
KRH63672	Soybean	nucleus	36.25	8.87
Bra038612.1-P	Field mustard	nucleus	38.75	8.54
Solyc06g071830.2.1	Tomato	nucleus	35.0	8.41
CDX84392	Canola	nucleus	37.5	8.29
CDY48173	Canola	nucleus	37.5	8.26
AT5G63160.1	Thale cress	nucleus	37.5	8.22
CDY39576	Canola	nucleus	37.5	8.17
Bra018065.1-P	Field mustard	nucleus	37.5	7.94
Bra029235.1-P	Field mustard	nucleus	36.25	7.88
CDY45741	Canola	nucleus	37.5	7.56
CDY30743	Canola	nucleus	37.5	7.56
HORVU3Hr1G090000.4	Barley	nucleus	35.0	6.54
HORVU2Hr1G083430.3	Barley	nucleus	3.75	1.71
CDY70710	Canola	nucleus	2.5	1.27
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	2.5	1.02
KRH37914	Soybean	cytosol	1.25	1.0
HORVU2Hr1G083490.1	Barley	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.2	UniProt:A0A287IP09	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0003712
GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:HORVU2Hr1G083410	EnsemblPlants:HORVU2Hr1G083410.1	InterPro:IPR000210	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413
PANTHER:PTHR24413:SF211	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000B46E561	:	:

Description

No Description!

Coordinates

chrchr2H:-:605283208..605284296

Molecular Weight (calculated)

8615.3 Da

IEP (calculated)

6.763

GRAVY (calculated)

0.229

Length

80 amino acids

Sequence
(BLAST)

1: MAICAGFDSY RASPADMRVV TSDGQSMAAH SYVLASASPV LERMIDRAQG GWGAECTIRV LGVSYDAVHA FIHFLYSPKC

Best Arabidopsis Sequence Match ( AT3G48360.2 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRYVPT CFVRNFTFEI NQKV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.