Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018065.1-P | Field mustard | nucleus | 92.29 | 88.62 |
| CDY39576 | Canola | nucleus | 87.05 | 86.1 |
| AT3G48360.1 | Thale cress | nucleus | 72.73 | 72.53 |
| CDY41504 | Canola | nucleus | 66.12 | 72.29 |
| CDX84392 | Canola | nucleus | 68.87 | 69.06 |
| CDY70710 | Canola | nucleus | 28.1 | 64.97 |
| CDY30743 | Canola | nucleus | 68.87 | 62.97 |
| CDY45741 | Canola | nucleus | 68.59 | 62.72 |
| PGSC0003DMT400069397 | Potato | nucleus | 55.65 | 60.66 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 56.75 | 59.37 |
| KRH57174 | Soybean | cytosol | 36.09 | 59.28 |
| Solyc06g071820.2.1 | Tomato | nucleus | 56.75 | 59.03 |
| PGSC0003DMT400039384 | Potato | nucleus | 53.72 | 56.52 |
| Solyc03g111710.2.1 | Tomato | nucleus | 53.72 | 56.52 |
| Solyc06g071830.2.1 | Tomato | nucleus | 50.14 | 54.65 |
| PGSC0003DMT400069392 | Potato | nucleus | 52.34 | 54.44 |
| KRH63672 | Soybean | nucleus | 48.21 | 53.52 |
| KRH03892 | Soybean | cytosol | 50.69 | 53.18 |
| KRH37914 | Soybean | cytosol | 12.95 | 47.0 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 45.18 | 46.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.8 | 46.22 |
| GSMUA_Achr11P... | Banana | nucleus | 44.9 | 45.92 |
| Os01t0908200-01 | Rice | cytosol | 41.32 | 43.23 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 40.22 | 42.82 |
| Zm00001d042443_P001 | Maize | cytosol | 40.22 | 42.44 |
| HORVU3Hr1G092090.3 | Barley | mitochondrion, nucleus | 22.86 | 42.13 |
| EES01931 | Sorghum | cytosol | 40.22 | 41.83 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 39.67 | 41.62 |
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 38.84 | 40.52 |
| TraesCS3B01G448000.1 | Wheat | cytosol, plastid | 38.57 | 40.46 |
| TraesCS2A01G323000.1 | Wheat | cytosol | 37.47 | 40.12 |
| TraesCS3D01G408100.1 | Wheat | cytosol, plastid | 38.29 | 39.83 |
| TraesCS2D01G339900.1 | Wheat | cytosol | 37.19 | 39.82 |
| GSMUA_Achr6P12420_001 | Banana | nucleus | 40.77 | 39.78 |
| TraesCS2B01G359600.1 | Wheat | cytosol | 36.91 | 39.53 |
| TraesCS3B01G448100.1 | Wheat | plastid | 38.29 | 39.49 |
| TraesCS3D01G408000.1 | Wheat | plastid | 38.29 | 39.38 |
| TraesCS2B01G359400.1 | Wheat | cytosol | 36.36 | 38.15 |
| TraesCS3A01G413700.1 | Wheat | cytosol, plastid | 36.64 | 37.89 |
| TraesCS2A01G323200.1 | Wheat | cytosol | 35.81 | 37.57 |
| Zm00001d025707_P001 | Maize | cytosol | 35.26 | 37.54 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 8.26 | 37.5 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 35.81 | 35.91 |
| Os04t0482300-01 | Rice | cytosol | 34.99 | 35.77 |
| EES05370 | Sorghum | plastid | 34.44 | 35.11 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 36.09 | 34.56 |
| Zm00001d017101_P001 | Maize | plastid | 34.99 | 34.42 |
| CDY29568 | Canola | nucleus | 35.81 | 34.3 |
| CDY50978 | Canola | nucleus, plastid | 35.26 | 34.22 |
| CDX75666 | Canola | nucleus | 34.99 | 33.96 |
| CDX72641 | Canola | nucleus, plastid | 35.26 | 33.68 |
| CDY36495 | Canola | cytosol | 35.26 | 33.68 |
| CDY08721 | Canola | cytosol | 34.99 | 33.42 |
| CDY10140 | Canola | plastid | 31.96 | 31.61 |
| CDX86561 | Canola | nucleus | 33.06 | 28.64 |
| CDY15554 | Canola | nucleus | 32.78 | 28.07 |
| HORVU2Hr1G083430.3 | Barley | nucleus | 12.95 | 26.86 |
| HORVU2Hr1G083490.1 | Barley | extracellular | 4.68 | 19.54 |
| Os02t0596700-00 | Rice | plastid | 13.5 | 16.44 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | GO:A0A078IGA2 |
| UniProt:A0A078IGA2 | InterPro:BTB/POZ_dom | EnsemblPlants:CDY48173 | ProteinID:CDY48173 | ProteinID:CDY48173.1 | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016573 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00088986001 | InterPro:IPR000197 | InterPro:IPR000210 |
| InterPro:IPR035898 | PFAM:PF00651 | PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF75 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 |
| InterPro:TAZ_dom_sf | UniParc:UPI0004EE103C | InterPro:Znf_TAZ | SEG:seg | : | : |
Description
BnaA06g16600DBnaA06g16600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGA2]
Coordinates
chrLK032757:-:143928..145942
Molecular Weight (calculated)
41102.2 Da
IEP (calculated)
9.222
GRAVY (calculated)
-0.275
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVLVAMAV TATSEDDGFS LITDKVSYNL TASDVTIVTS GNRRIPAHSG ILASASPVLM NIMKKTVKRY QRYGAKRAIK ILGVPCDAVS VFIRFLYSSS
101: LTEDELEKYG IHLLALSHVY MVANLKQRCS RGVVDGLTAE NVVDVLQLAR LCDAPDVCLK SMRLIQSQFK TVEQTEGWKF LQEHDPVLEL DILQFIDDSE
201: SRKKRRRRHK KEQNLYMQLS EAMECIEHIC TQGCTLVGPT NIPCEAVSTC YGLQLSIRHF AVCKKRSNEN GCLRCKRMLQ LLRLHSSICD QPESCRVPLC
301: SRQFKKRVEQ DKRMGEDTKW KLLVRRVVSA KAMSSLCQSS KKNKYDGEAE GLVRNRTGMR WGL
101: LTEDELEKYG IHLLALSHVY MVANLKQRCS RGVVDGLTAE NVVDVLQLAR LCDAPDVCLK SMRLIQSQFK TVEQTEGWKF LQEHDPVLEL DILQFIDDSE
201: SRKKRRRRHK KEQNLYMQLS EAMECIEHIC TQGCTLVGPT NIPCEAVSTC YGLQLSIRHF AVCKKRSNEN GCLRCKRMLQ LLRLHSSICD QPESCRVPLC
301: SRQFKKRVEQ DKRMGEDTKW KLLVRRVVSA KAMSSLCQSS KKNKYDGEAE GLVRNRTGMR WGL
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.