CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
endoplasmic reticulum 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05529
EES07108
EES09373
EES16732
KXG24325

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	EES05529	AT1G26830.1	15772280
AT3G48360.1	EES09373	AT1G35670.1	19130088
AT3G48360.1	EES16732	AT1G35670.1	19130088
AT3G48360.1	EES07108	AT3G01770.1	15316289
AT3G48360.1	KXG24325	AT3G01770.1	15316289
AT3G48360.1	EES09373	AT4G09570.1	19130088
AT3G48360.1	EES16732	AT4G09570.1	19130088
AT5G63160.1	EES05529	AT1G26830.1	15772280
AT5G63160.1	EES07108	AT3G01770.1	15316289
AT5G63160.1	KXG24325	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017101_P001	Maize	plastid	80.34	77.51
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	58.43	57.46
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	48.88	49.29
GSMUA_Achr9P02050_001	Banana	cytosol	46.07	48.09
GSMUA_Achr6P12110_001	Banana	nucleus	44.66	45.95
PGSC0003DMT400069397	Potato	nucleus	39.89	42.64
EES01931	Sorghum	cytosol	39.89	40.69
Solyc06g071820.2.1	Tomato	nucleus	39.33	40.11
Solyc03g111710.2.1	Tomato	nucleus	38.2	39.42
PGSC0003DMT400039384	Potato	nucleus	38.2	39.42
KRH57174	Soybean	cytosol	24.16	38.91
KRH63672	Soybean	nucleus	35.39	38.53
PGSC0003DMT400069392	Potato	nucleus	37.08	37.82
KRH03892	Soybean	cytosol	36.24	37.28
Solyc06g071830.2.1	Tomato	nucleus	34.83	37.24
VIT_17s0000g09790.t01	Wine grape	cytosol	35.67	36.6
CDY41504	Canola	nucleus	33.99	36.45
Bra029235.1-P	Field mustard	nucleus	36.52	35.33
Bra038612.1-P	Field mustard	nucleus	35.67	34.99
AT5G63160.1	Thale cress	nucleus	35.67	34.79
AT3G48360.1	Thale cress	nucleus	35.39	34.62
CDX84392	Canola	nucleus	35.11	34.53
CDY48173	Canola	nucleus	35.11	34.44
Bra018065.1-P	Field mustard	nucleus	35.11	33.07
CDY39576	Canola	nucleus	33.99	32.97
CDY30743	Canola	nucleus	36.52	32.75
CDY45741	Canola	nucleus	35.67	31.99
CDY70710	Canola	nucleus	13.2	29.94
KRH37914	Soybean	cytosol	8.15	29.0
Os02t0596700-00	Rice	plastid	21.91	26.17
OQU88021	Sorghum	nucleus	30.06	25.18

Protein Annotations

Gene3D:1.20.1020.10	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	EntrezGene:8056481	InterPro:BTB/POZ_dom
UniProt:C5XX37	EnsemblPlants:EES05370	ProteinID:EES05370	ProteinID:EES05370.1	GO:GO:0003674	GO:GO:0003712
GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162
GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF211	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3004G203200	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI0001A8524F
RefSeq:XP_002452394.1	InterPro:Znf_TAZ	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:55504038..55506686

Molecular Weight (calculated)

38807.3 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.243

Length

356 amino acids

Sequence
(BLAST)

001: MAFCADFAAL RPSPADVRVV TSDGSTIRAH SSVLAAASPV LERMIVGARG RGWDAADCTT VRVLGAPSDA VVAFLRFLYS NPRAAAGAGE WAEEEDAHGP
101: ALLALAHAYR VPWLKRRAEA AVAARGLTAE RAVDALKLAA LCDAPRLYLA CARLAAKDLD AVERSEGWRF AGRHDAALRL NLLHLLHDAD QRKERWERER
201: ASQHVYGQLS DAMAFLDRIF AGTEEASPSP CEDEDEDGVR WGLEQLMRHF AACGGRTRKP AACPRCTRAL QLLRLHASVC DRAGDGDGDG GEPCKVALCS
301: NLKAKMQEEG VDTTWKLLVK KVTRARVMSA LASREVPEVV KKSWAKYSSR RAARIR

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.