Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- nucleus 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d023560_P002 | Maize | cytosol | 72.04 | 95.13 |
HORVU5Hr1G032550.3 | Barley | cytosol | 93.01 | 92.12 |
Os12t0169800-00 | Rice | plasma membrane | 92.43 | 90.49 |
TraesCS5D01G122800.1 | Wheat | cytosol | 92.82 | 90.36 |
TraesCS5B01G115400.1 | Wheat | cytosol | 92.43 | 89.98 |
EES09373 | Sorghum | cytosol, plastid | 89.32 | 89.32 |
TraesCS5A01G107900.1 | Wheat | cytosol | 92.43 | 84.4 |
GSMUA_Achr9P08680_001 | Banana | cytosol | 74.95 | 81.78 |
GSMUA_Achr10P... | Banana | cytosol, plastid | 79.81 | 81.55 |
GSMUA_Achr2P08110_001 | Banana | cytosol, plastid | 77.67 | 80.81 |
GSMUA_Achr6P25560_001 | Banana | cytosol | 72.62 | 77.75 |
VIT_07s0130g00130.t01 | Wine grape | cytosol | 74.56 | 77.26 |
KRH63919 | Soybean | cytosol | 72.62 | 75.4 |
Solyc04g049160.2.1 | Tomato | cytosol | 73.79 | 74.8 |
KRG91803 | Soybean | mitochondrion | 71.07 | 74.69 |
KRH54032 | Soybean | cytosol | 71.84 | 74.45 |
KRH34984 | Soybean | cytosol | 71.07 | 74.39 |
KRH59698 | Soybean | plastid | 73.01 | 74.16 |
KRH41022 | Soybean | plastid | 73.01 | 74.02 |
AT1G35670.1 | Thale cress | cytosol | 70.87 | 73.74 |
CDY37101 | Canola | cytosol | 71.07 | 73.64 |
Bra034407.1-P | Field mustard | cytosol | 71.07 | 73.64 |
VIT_18s0072g01030.t01 | Wine grape | cytosol, mitochondrion | 69.9 | 73.62 |
CDX73342 | Canola | nucleus, plasma membrane | 70.87 | 73.44 |
CDY05064 | Canola | cytosol | 71.26 | 73.4 |
CDX90725 | Canola | cytosol | 71.26 | 73.4 |
PGSC0003DMT400060262 | Potato | cytosol | 71.65 | 73.36 |
Solyc05g056570.2.1 | Tomato | cytosol | 71.65 | 73.36 |
AT4G09570.1 | Thale cress | cytosol | 71.07 | 73.05 |
CDX87164 | Canola | cytosol | 68.74 | 72.99 |
CDX80376 | Canola | cytosol | 69.51 | 72.91 |
PGSC0003DMT400067082 | Potato | cytosol, plastid | 70.87 | 72.85 |
AT5G23580.1 | Thale cress | cytosol, mitochondrion | 69.13 | 72.65 |
CDY16860 | Canola | cytosol | 68.54 | 72.63 |
Solyc06g065380.2.1 | Tomato | cytosol, plastid | 70.87 | 71.99 |
Solyc11g018610.1.1 | Tomato | cytosol | 70.49 | 71.88 |
PGSC0003DMT400002331 | Potato | cytosol | 70.29 | 71.68 |
Bra029376.1-P | Field mustard | cytosol | 63.11 | 70.35 |
CDX92440 | Canola | cytosol | 67.18 | 70.04 |
CDY46964 | Canola | cytosol | 65.63 | 69.98 |
CDY46962 | Canola | cytosol | 62.52 | 69.55 |
Bra029378.1-P | Field mustard | cytosol | 65.24 | 69.42 |
CDY16557 | Canola | cytosol | 65.44 | 69.2 |
CDY40790 | Canola | cytosol | 61.75 | 68.83 |
CDY40788 | Canola | cytosol | 64.47 | 68.59 |
CDY46963 | Canola | cytosol | 56.7 | 68.54 |
Bra029377.1-P | Field mustard | cytosol | 56.12 | 67.84 |
KRH34983 | Soybean | cytosol | 63.11 | 67.43 |
CDY40789 | Canola | cytosol | 64.27 | 64.4 |
OQU86029 | Sorghum | cytosol | 61.55 | 62.9 |
EER90764 | Sorghum | plastid | 68.74 | 60.51 |
EES11322 | Sorghum | mitochondrion | 65.05 | 60.36 |
EER98014 | Sorghum | cytosol, plastid | 67.18 | 59.55 |
OQU85618 | Sorghum | mitochondrion | 65.05 | 59.29 |
EES01628 | Sorghum | cytosol | 57.28 | 56.73 |
EER93328 | Sorghum | cytosol | 67.57 | 56.4 |
EES19734 | Sorghum | plastid | 57.28 | 55.98 |
KXG36322 | Sorghum | cytosol | 57.67 | 55.93 |
KXG23457 | Sorghum | plastid | 65.83 | 55.03 |
EES01094 | Sorghum | cytosol, mitochondrion | 55.53 | 54.48 |
EES07931 | Sorghum | cytosol | 56.89 | 54.46 |
EER95585 | Sorghum | cytosol | 57.09 | 54.04 |
EES20022 | Sorghum | cytosol, mitochondrion | 56.12 | 53.42 |
EES12651 | Sorghum | cytosol | 53.98 | 52.16 |
EES16538 | Sorghum | cytosol | 57.86 | 51.92 |
EER94580 | Sorghum | cytosol | 49.9 | 47.77 |
CDX88038 | Canola | cytosol | 69.51 | 39.6 |
Bra009697.1-P | Field mustard | cytosol | 69.13 | 38.7 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr8:-:5378368..5382772
Molecular Weight (calculated)
56730.8 Da
IEP (calculated)
5.383
GRAVY (calculated)
-0.286
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPDPQGPGR GKAGGANAHV RLPPPVTAGS GGRPASVLPH KTDNVRDHYR IGKKLGQGQF GTTYQCVGKA DGAEYACKSI PKRKLLCRED YEDAWREIQI
101: MHHLSEHPNV VRIRGAYEDA LFVHLVMELC AGGELFDRIV AKGHYTERAA AQLIRTIVGV VQGCHSLGVM HRDLKPENFL FASTAEDAPL KATDFGLSVF
201: YKPGDKFADV VGSPYYVAPE VLQKCYGPEA DVWSAGVILY ILLCGVPPFW AESEAGIFRQ ILRGKLDLES EPWPSISDSA KDLVRKMLIR DPAKRLTAHE
301: VLCHPWIVDD SVAPDKPIDS AVLSRLKNFS AMNKLKKMAL RVIAESLSEE EIGGLKELFK MIDTDNSGTI TYDELKDGLK RVGSDLMEPE IQALMDAADI
401: DNSGTIDYGE FLAATLHMNK LEREESLVSA FAFFDKDGSG FITIDELSQA CEQFGLSDVH LEDMIKDVDQ NNDGQIDYSE FAAMMRKGNA GGTGRRTMRS
501: SLHVNLGELL KPSET
101: MHHLSEHPNV VRIRGAYEDA LFVHLVMELC AGGELFDRIV AKGHYTERAA AQLIRTIVGV VQGCHSLGVM HRDLKPENFL FASTAEDAPL KATDFGLSVF
201: YKPGDKFADV VGSPYYVAPE VLQKCYGPEA DVWSAGVILY ILLCGVPPFW AESEAGIFRQ ILRGKLDLES EPWPSISDSA KDLVRKMLIR DPAKRLTAHE
301: VLCHPWIVDD SVAPDKPIDS AVLSRLKNFS AMNKLKKMAL RVIAESLSEE EIGGLKELFK MIDTDNSGTI TYDELKDGLK RVGSDLMEPE IQALMDAADI
401: DNSGTIDYGE FLAATLHMNK LEREESLVSA FAFFDKDGSG FITIDELSQA CEQFGLSDVH LEDMIKDVDQ NNDGQIDYSE FAAMMRKGNA GGTGRRTMRS
501: SLHVNLGELL KPSET
001: MEKPNPRRPS NSVLPYETPR LRDHYLLGKK LGQGQFGTTY LCTEKSSSAN YACKSIPKRK LVCREDYEDV WREIQIMHHL SEHPNVVRIK GTYEDSVFVH
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
Arabidopsis Description
CPK4Calcium-dependent protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38869]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.