CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	EES09373	AT4G09570.1	19130088
AT4G32070.1	EES16732	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021400_P001	Maize	cytosol	93.93	94.61
Os09t0556200-00	Rice	cytosol, plasma membrane	85.69	86.44
HORVU5Hr1G088290.2	Barley	cytosol	81.5	80.92
TraesCS5A01G357000.1	Wheat	cytosol	81.21	80.86
TraesCS5D01G366100.1	Wheat	cytosol	80.78	80.43
TraesCS5B01G359500.1	Wheat	cytosol	80.49	79.91
KRG84467	Soybean	cytosol	12.72	67.69
GSMUA_Achr4P20360_001	Banana	cytosol	61.42	63.43
Zm00001d037923_P001	Maize	cytosol	14.31	61.11
GSMUA_Achr3P00890_001	Banana	cytosol	59.25	61.01
GSMUA_Achr7P05370_001	Banana	cytosol	56.94	60.43
GSMUA_Achr4P04120_001	Banana	cytosol	43.79	59.18
KRH05201	Soybean	cytosol	25.72	59.14
VIT_11s0118g00490.t01	Wine grape	cytosol	55.35	56.49
GSMUA_Achr9P22500_001	Banana	cytosol	54.91	55.15
Solyc08g029190.2.1	Tomato	nucleus	52.89	54.71
PGSC0003DMT400049152	Potato	cytosol	52.31	54.19
PGSC0003DMT400038437	Potato	cytosol	52.31	54.19
Solyc06g065910.2.1	Tomato	cytosol	51.88	52.41
PGSC0003DMT400067142	Potato	cytosol	51.01	51.53
VIT_04s0008g06310.t01	Wine grape	mitochondrion	55.78	51.4
CDX68815	Canola	cytosol, nucleus, plastid	50.0	50.66
CDY38510	Canola	nucleus	50.29	50.0
KRH61724	Soybean	cytosol	52.17	49.72
CDY11535	Canola	nucleus	50.29	49.29
CDY58928	Canola	cytosol	49.71	49.21
CDX83226	Canola	cytosol	50.43	48.47
CDX75218	Canola	cytosol	50.72	48.41
KRH37816	Soybean	cytosol	51.01	48.36
Solyc07g007390.2.1	Tomato	nucleus	54.34	48.33
KRH20222	Soybean	nucleus	50.14	47.93
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	49.86	47.78
KRH03587	Soybean	nucleus	49.71	47.45
AT2G25290.4	Thale cress	cytosol	51.01	47.38
EES13437	Sorghum	cytosol	50.58	47.11
CDY13473	Canola	nucleus	48.84	46.75
Bra000549.1-P	Field mustard	nucleus	51.3	46.41
Bra007805.1-P	Field mustard	nucleus	50.58	46.36
CDX72344	Canola	nucleus	46.97	46.3
Bra023964.1-P	Field mustard	nucleus	48.27	45.94
PGSC0003DMT400078952	Potato	cytosol	53.76	45.87
AT4G32070.1	Thale cress	nucleus	49.71	43.99
KRH52396	Soybean	cytosol	6.5	43.69
KRH05202	Soybean	cytosol	20.38	40.52
CDY51850	Canola	cytosol	35.55	38.68
EER96429	Sorghum	plastid	51.73	38.54
Bra006557.1-P	Field mustard	cytosol	36.27	37.74
CDX70924	Canola	cytosol	34.54	37.52
EES00364	Sorghum	plastid	36.13	32.05
AT5G20360.1	Thale cress	cytosol	37.43	32.01

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EntrezGene:8077245	UniProt:C5X7S2	ncoils:Coil
EnsemblPlants:EER97166	ProteinID:EER97166	ProteinID:EER97166.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564
PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF429	SMART:SM00028
SMART:SM00666	EnsemblPlantsGene:SORBI_3002G293300	SUPFAM:SSF48452	SUPFAM:SSF54277	unigene:Sbi.19303	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A83A85	RefSeq:XP_002460645.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:67120266..67125455

Molecular Weight (calculated)

78320.8 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.552

Length

692 amino acids

Sequence
(BLAST)

001: MGKPSLKKKR ASGGGGKSGD HGGKSASLER SGSKVLDGDE TLFTDMAQEH KEEGNKLFQR RDYDRALLNY DKAIKLLPRA HPDVAYLHSN IAACYMQMSP
101: PDYYRAINEC NVALETSPKY TKALLKRARC FEALGRLDLA CRDVNKVLVL EPNNLTALDV ADRVKKSMEE KGIVLDDKEI MPTPEEVVAA APKQKPRKKR
201: GGRKFAAKAA AAAVEEVDEQ KIAEAVKEEE VEEQPRQVKL VFGEDIRWAQ VPASCSMAQL REAVRSKFPG LKAVLVKYKD KEGDLVTITN QDELKWAEDL
301: AEAGSSLRLY VTEANPEHEP YVDDTNSGPL ERNVNSASDN GSIRSNRQDE DRSTVTCIDD WIVQFARLFK NHVGISSDEY LDLHEVSMKL YTEAIEDTIT
401: TEEAQEVFNL AEGNFQEMAA LAFFHWGNVH MSRARKRLLL SGDSPRELVL EQVKEAYEWA RDEYNKAGKR YEDAVKAKPD FFEGFLALAH QQFEQAKLSW
501: YYAIGSNADL DSCSSEILEL FNKAEDNIEK GIEMWELMEE QRLKNRSKPS QENVVLEKMG LEEYIKDVST DDAAEQASNL RSQINILWGM LLYERSVVEF
601: KLGLPMWEDC LMAAIEKFKL GGASATDIAV LVKNHCANET AQDGLGFKID EIVQAWNEMY DIKRWLRGVP SFRLEPLFRR RVPQLHTALE HI

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.